Analysis of interatomic Contacts of Structural Units in PDB entry:
6AO8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AO8 entry

There is 1 chain in PDB entry 6AO8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1MET 572
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6AO8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 18Right-handed alpha
Helix 2
AA2
A
42 48Right-handed alpha
Helix 3
AA3
A
53 65Right-handed alpha
Helix 4
AA4
A
87 101Right-handed alpha
Helix 5
AA5
A
129 149Right-handed alpha
Helix 6
AA6
A
164 180Right-handed alpha
Helix 7
AA7
A
187 202Right-handed alpha
Helix 8
AA8
A
202 219Right-handed alpha
Helix 9
AA9
A
220 246Right-handed alpha
Helix 10
AB1
A
250 254Right-handed 310
Helix 11
AB2
A
256 262Right-handed 310
Helix 12
AB3
A
263 274Right-handed alpha
Helix 13
AB4
A
289 292Right-handed 310
Helix 14
AB5
A
311 326Right-handed alpha
Helix 15
AB6
A
340 354Right-handed alpha
Helix 16
AB7
A
388 408Right-handed alpha
Helix 17
AB8
A
412 434Right-handed alpha
Helix 18
AB9
A
444 449Right-handed alpha
Helix 19
AC1
A
455 474Right-handed alpha
Helix 20
AC2
A
486 497Right-handed alpha
Helix 21
AC3
A
498 510Right-handed alpha
Helix 22
AC4
A
512 533Right-handed alpha
Helix 23
AC5
A
539 564Right-handed alpha
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There are 4 sheets in PDB entry 6AO8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 29first strand
Strand 2
A
38 40anti-parallel
Strand 3
A
81 86anti-parallel
Strand 4
A
71 77anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 156first strand
Strand 2
A
114 118parallel
Strand 3
A
331 337parallel
Strand 4
A
362 368parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 280first strand
Strand 2
A
283 288anti-parallel
Strand 3
A
299 304anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 372first strand
Strand 2
A
441 442parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il