Analysis of interatomic Contacts of Structural Units in PDB entry:
6AOJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AOJ entry

There is 1 chain in PDB entry 6AOJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR -5PRO 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6AOJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 22Right-handed 310
Helix 2
AA2
A
25 31Right-handed alpha
Helix 3
AA3
A
50 63Right-handed alpha
Helix 4
AA4
A
75 79Right-handed 310
Helix 5
AA5
A
81 92Right-handed alpha
Helix 6
AA6
A
106 117Right-handed alpha
Helix 7
AA7
A
120 126Right-handed alpha
Helix 8
AA8
A
134 143Right-handed alpha
Helix 9
AA9
A
159 173Right-handed alpha
Helix 10
AB1
A
191 203Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6AOJ.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 130first strand
Strand 2
A
97 102parallel
Strand 3
A
4 8parallel
Strand 4
A
152 156parallel
Strand 5
A
180 183parallel
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