Analysis of interatomic Contacts of Structural Units in PDB entry:
6AQN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AQN entry

There is 1 chain in PDB entry 6AQN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LYS 302
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 6AQN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 16Right-handed alpha
Helix 2
AA2
A
39 64Right-handed alpha
Helix 3
AA3
A
80 91Right-handed alpha
Helix 4
AA4
A
92 95Right-handed 310
Helix 5
AA5
A
106 111Right-handed alpha
Helix 6
AA6
A
115 121Right-handed alpha
Helix 7
AA7
A
134 139Right-handed 310
Helix 8
AA8
A
140 145Right-handed alpha
Helix 9
AA9
A
147 152Right-handed alpha
Helix 10
AB1
A
159 163Right-handed 310
Helix 11
AB2
A
164 184Right-handed alpha
Helix 12
AB3
A
197 210Right-handed alpha
Helix 13
AB4
A
214 219Right-handed 310
Helix 14
AB5
A
220 228Right-handed alpha
Helix 15
AB6
A
228 241Right-handed alpha
Helix 16
AB7
A
257 274Right-handed alpha
Helix 17
AB8
A
275 277Right-handed 310
Helix 18
AB9
A
284 300Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6AQN.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 101first strand
Strand 2
A
128 132parallel
Strand 3
A
68 75parallel
Strand 4
A
187 195parallel
Strand 5
A
250 254parallel
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