Analysis of interatomic Contacts of Structural Units in PDB entry:
6AS7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AS7 entry

There are 3 chains in PDB entry 6AS7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 338VAL 1248
B
 G 1 C 11
C
 A 109 C 121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6AS7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
368 371Right-handed 310
Helix 2
AA2
A
409 420Right-handed alpha
Helix 3
AA3
A
420 425Right-handed alpha
Helix 4
AA4
A
482 491Right-handed alpha
Helix 5
AA5
A
522 524Right-handed 310
Helix 6
AA6
A
597 606Right-handed alpha
Helix 7
AA7
A
614 630Right-handed alpha
Helix 8
AA8
A
642 654Right-handed alpha
Helix 9
AA9
A
658 663Right-handed 310
Helix 10
AB1
A
679 685Right-handed alpha
Helix 11
AB2
A
693 701Right-handed alpha
Helix 12
AB3
A
707 717Right-handed alpha
Helix 13
AB4
A
724 732Right-handed alpha
Helix 14
AB5
A
734 760Right-handed alpha
Helix 15
AB6
A
760 773Right-handed alpha
Helix 16
AB7
A
775 781Right-handed alpha
Helix 17
AB8
A
783 799Right-handed alpha
Helix 18
AB9
A
863 872Right-handed alpha
Helix 19
AC1
A
909 927Right-handed alpha
Helix 20
AC2
A
937 962Right-handed alpha
Helix 21
AC3
A
969 994Right-handed alpha
Helix 22
AC4
A
1014 1031Right-handed alpha
Helix 23
AC5
A
1085 1100Right-handed alpha
Helix 24
AC6
A
1104 1125Right-handed alpha
Helix 25
AC7
A
1142 1146Right-handed 310
Helix 26
AC8
A
1152 1163Right-handed alpha
Helix 27
AC9
A
1187 1190Right-handed 310
Helix 28
AD1
A
1194 1201Right-handed alpha
Helix 29
AD2
A
1207 1215Right-handed alpha
Helix 30
AD3
A
1215 1225Right-handed alpha
Helix 31
AD4
A
1231 1240Right-handed alpha
Helix 32
AD5
A
1242 1246Right-handed 310
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There are 8 sheets in PDB entry 6AS7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 505first strand
Strand 2
A
516 520anti-parallel
Strand 3
A
372 380parallel
Strand 4
A
359 367anti-parallel
Strand 5
A
340 349anti-parallel
Strand 6
A
497 502anti-parallel
Strand 7
A
526 528anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 438first strand
Strand 2
A
449 457anti-parallel
Strand 3
A
385 391anti-parallel
Strand 4
A
473 477anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 397first strand
Strand 2
A
402 407anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 612first strand
Strand 2
A
581 587parallel
Strand 3
A
555 565anti-parallel
Strand 4
A
539 548anti-parallel
Strand 5
A
633 636parallel
Strand 6
A
689 692parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
844 845first strand
Strand 2
A
997 1002anti-parallel
Strand 3
A
1005 1009anti-parallel
Strand 4
A
856 861anti-parallel
Strand 5
A
1038 1051anti-parallel
Strand 6
A
850 852anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
844 845first strand
Strand 2
A
997 1002anti-parallel
Strand 3
A
1005 1009anti-parallel
Strand 4
A
856 861anti-parallel
Strand 5
A
1038 1051anti-parallel
Strand 6
A
1054 1062anti-parallel
Strand 7
A
1068 1072anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1138first strand
Strand 2
A
1174 1181anti-parallel
Strand 3
A
1192 1193anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1138first strand
Strand 2
A
1174 1181anti-parallel
Strand 3
A
1205 1206anti-parallel
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