Analysis of interatomic Contacts of Structural Units in PDB entry:
6AT6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AT6 entry

There are 2 chains in PDB entry 6AT6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 7ALA 246
A
 LEU 11ASN 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6AT6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
86 90Right-handed 310
Helix 2
AA2
B
99 103Right-handed 310
Helix 3
AA3
B
134 142Right-handed alpha
Helix 4
AA4
B
201 205Right-handed alpha
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
175 178Right-handed 310
Helix 8
AA8
A
194 199Right-handed alpha
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There are 10 sheets in PDB entry 6AT6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
23 29anti-parallel
Strand 3
B
77 82anti-parallel
Strand 4
B
69 71anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 18first strand
Strand 2
B
112 117parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
35 42anti-parallel
Strand 5
B
46 53anti-parallel
Strand 6
B
60 61anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 18first strand
Strand 2
B
112 117parallel
Strand 3
B
91 98anti-parallel
Strand 4
B
107 108anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 131first strand
Strand 2
B
143 153anti-parallel
Strand 3
B
191 200anti-parallel
Strand 4
B
173 175anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 131first strand
Strand 2
B
143 153anti-parallel
Strand 3
B
191 200anti-parallel
Strand 4
B
180 181anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
158 164anti-parallel
Strand 3
B
210 217anti-parallel
Strand 4
B
236 243anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
116 121parallel
Strand 3
A
94 101anti-parallel
Strand 4
A
42 48anti-parallel
Strand 5
A
55 60anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 33first strand
Strand 2
A
80 85anti-parallel
Strand 3
A
71 73anti-parallel
Strand 4
A
65 66anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 135first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
179 188anti-parallel
Strand 4
A
164 166anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 135first strand
Strand 2
A
143 148anti-parallel
Strand 3
A
179 188anti-parallel
Strand 4
A
170 174anti-parallel
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