Analysis of interatomic Contacts of Structural Units in PDB entry:
6AT7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AT7 entry

There are 4 chains in PDB entry 6AT7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 9THR 188
A
 ASP 192VAL 702
B
 ASN 4THR 188
B
 ASP 192VAL 702
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 6AT7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 22Right-handed alpha
Helix 2
AA2
A
25 37Right-handed alpha
Helix 3
AA3
A
50 60Right-handed alpha
Helix 4
AA4
A
74 91Right-handed alpha
Helix 5
AA5
A
112 125Right-handed alpha
Helix 6
AA6
A
139 153Right-handed alpha
Helix 7
AA7
A
162 176Right-handed alpha
Helix 8
AA8
A
192 204Right-handed alpha
Helix 9
AA9
A
221 229Right-handed alpha
Helix 10
AB1
A
240 247Right-handed alpha
Helix 11
AB2
A
249 282Right-handed alpha
Helix 12
AB3
A
284 288Right-handed 310
Helix 13
AB4
A
289 295Right-handed alpha
Helix 14
AB5
A
298 314Right-handed alpha
Helix 15
AB6
A
315 328Right-handed alpha
Helix 16
AB7
A
337 342Right-handed alpha
Helix 17
AB8
A
342 365Right-handed alpha
Helix 18
AB9
A
389 418Right-handed alpha
Helix 19
AC1
A
427 431Right-handed 310
Helix 20
AC2
A
435 439Right-handed 310
Helix 21
AC3
A
442 460Right-handed alpha
Helix 22
AC4
A
463 467Right-handed 310
Helix 23
AC5
A
480 536Right-handed alpha
Helix 24
AC6
A
537 541Right-handed 310
Helix 25
AC7
A
548 559Right-handed alpha
Helix 26
AC8
A
561 565Right-handed 310
Helix 27
AC9
A
574 591Right-handed alpha
Helix 28
AD1
A
592 595Right-handed 310
Helix 29
AD2
A
596 629Right-handed alpha
Helix 30
AD3
A
635 640Right-handed 310
Helix 31
AD4
A
642 651Right-handed alpha
Helix 32
AD5
A
665 679Right-handed alpha
Helix 33
AD6
A
682 689Right-handed alpha
Helix 34
AD7
B
14 21Right-handed alpha
Helix 35
AD8
B
25 38Right-handed alpha
Helix 36
AD9
B
50 60Right-handed alpha
Helix 37
AE1
B
74 91Right-handed alpha
Helix 38
AE2
B
112 125Right-handed alpha
Helix 39
AE3
B
139 153Right-handed alpha
Helix 40
AE4
B
162 176Right-handed alpha
Helix 41
AE5
B
192 204Right-handed alpha
Helix 42
AE6
B
221 229Right-handed alpha
Helix 43
AE7
B
240 247Right-handed alpha
Helix 44
AE8
B
249 282Right-handed alpha
Helix 45
AE9
B
284 288Right-handed 310
Helix 46
AF1
B
289 295Right-handed alpha
Helix 47
AF2
B
298 314Right-handed alpha
Helix 48
AF3
B
315 324Right-handed alpha
Helix 49
AF4
B
337 342Right-handed alpha
Helix 50
AF5
B
342 365Right-handed alpha
Helix 51
AF6
B
389 418Right-handed alpha
Helix 52
AF7
B
427 431Right-handed 310
Helix 53
AF8
B
435 439Right-handed 310
Helix 54
AF9
B
442 460Right-handed alpha
Helix 55
AG1
B
463 467Right-handed 310
Helix 56
AG2
B
480 535Right-handed alpha
Helix 57
AG3
B
550 559Right-handed alpha
Helix 58
AG4
B
561 565Right-handed 310
Helix 59
AG5
B
574 591Right-handed alpha
Helix 60
AG6
B
598 605Right-handed alpha
Helix 61
AG7
B
605 628Right-handed alpha
Helix 62
AG8
B
635 640Right-handed 310
Helix 63
AG9
B
642 651Right-handed alpha
Helix 64
AH1
B
665 679Right-handed alpha
Helix 65
AH2
B
682 689Right-handed alpha
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There are 6 sheets in PDB entry 6AT7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
67 70parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 179first strand
Strand 2
A
210 212anti-parallel
Strand 3
A
218 220anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 375first strand
Strand 2
A
380 382anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
67 70parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 179first strand
Strand 2
B
210 212anti-parallel
Strand 3
B
218 220anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 375first strand
Strand 2
B
380 382anti-parallel
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