Analysis of interatomic Contacts of Structural Units in PDB entry:
6ATG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ATG entry

There are 4 chains in PDB entry 6ATG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 370LYS 428
B
 GLY 22GLN 233
C
 MET 24THR 234
D
 HIS 368LYS 428
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6ATG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
404 408Right-handed 310
Helix 2
AA2
B
23 39Right-handed alpha
Helix 3
AA3
B
41 66Right-handed alpha
Helix 4
AA4
B
70 83Right-handed alpha
Helix 5
AA5
B
85 98Right-handed alpha
Helix 6
AA6
B
99 102Right-handed 310
Helix 7
AA7
B
103 120Right-handed alpha
Helix 8
AA8
B
127 156Right-handed alpha
Helix 9
AA9
B
159 180Right-handed alpha
Helix 10
AB1
B
180 197Right-handed alpha
Helix 11
AB2
B
213 233Right-handed alpha
Helix 12
AB3
C
25 39Right-handed alpha
Helix 13
AB4
C
41 66Right-handed alpha
Helix 14
AB5
C
70 83Right-handed alpha
Helix 15
AB6
C
85 99Right-handed alpha
Helix 16
AB7
C
106 119Right-handed alpha
Helix 17
AB8
C
127 156Right-handed alpha
Helix 18
AB9
C
159 180Right-handed alpha
Helix 19
AC1
C
180 197Right-handed alpha
Helix 20
AC2
C
213 230Right-handed alpha
Helix 21
AC3
D
404 408Right-handed 310
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There are 6 sheets in PDB entry 6ATG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 372first strand
Strand 2
A
387 388anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
410 414anti-parallel
Strand 3
A
417 419anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 403first strand
Strand 2
A
425 426anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
371 372first strand
Strand 2
D
387 388anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
393 395first strand
Strand 2
D
410 414anti-parallel
Strand 3
D
417 419anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
402 403first strand
Strand 2
D
425 426anti-parallel
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