Analysis of interatomic Contacts of Structural Units in PDB entry:
6AU1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AU1 entry

There are 2 chains in PDB entry 6AU1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 318SER 670
B
 PRO 318SER 670
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6AU1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
326 331Right-handed alpha
Helix 2
AA2
A
334 353Right-handed alpha
Helix 3
AA3
A
387 399Right-handed alpha
Helix 4
AA4
A
447 465Right-handed alpha
Helix 5
AA5
A
485 495Right-handed alpha
Helix 6
AA6
A
500 507Right-handed alpha
Helix 7
AA7
A
507 537Right-handed alpha
Helix 8
AA8
A
550 555Right-handed alpha
Helix 9
AA9
A
558 563Right-handed alpha
Helix 10
AB1
A
565 573Right-handed alpha
Helix 11
AB2
A
581 586Right-handed alpha
Helix 12
AB3
A
589 604Right-handed alpha
Helix 13
AB4
A
626 640Right-handed alpha
Helix 14
AB5
A
658 667Right-handed alpha
Helix 15
AB6
B
326 331Right-handed alpha
Helix 16
AB7
B
334 353Right-handed alpha
Helix 17
AB8
B
387 400Right-handed alpha
Helix 18
AB9
B
447 465Right-handed alpha
Helix 19
AC1
B
485 495Right-handed alpha
Helix 20
AC2
B
500 507Right-handed alpha
Helix 21
AC3
B
507 537Right-handed alpha
Helix 22
AC4
B
550 555Right-handed alpha
Helix 23
AC5
B
558 563Right-handed alpha
Helix 24
AC6
B
565 573Right-handed alpha
Helix 25
AC7
B
581 586Right-handed alpha
Helix 26
AC8
B
589 604Right-handed alpha
Helix 27
AC9
B
626 640Right-handed alpha
Helix 28
AD1
B
658 667Right-handed alpha
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There are 4 sheets in PDB entry 6AU1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 325first strand
Strand 2
A
356 360parallel
Strand 3
A
402 407parallel
Strand 4
A
469 472parallel
Strand 5
A
543 548parallel
Strand 6
A
575 579parallel
Strand 7
A
610 615parallel
Strand 8
A
645 648parallel
Strand 9
A
321 325parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 618first strand
Strand 2
A
623 624anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 325first strand
Strand 2
B
356 360parallel
Strand 3
B
402 407parallel
Strand 4
B
469 472parallel
Strand 5
B
543 548parallel
Strand 6
B
575 579parallel
Strand 7
B
610 615parallel
Strand 8
B
645 648parallel
Strand 9
B
321 325parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
617 618first strand
Strand 2
B
623 624anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il