Analysis of interatomic Contacts of Structural Units in PDB entry:
6AUF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AUF entry

There is 1 chain in PDB entry 6AUF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 33ALA 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6AUF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
35 40Right-handed alpha
Helix 2
AA2
B
45 49Right-handed 310
Helix 3
AA3
B
91 101Right-handed alpha
Helix 4
AA4
B
105 107Right-handed 310
Helix 5
AA5
B
118 123Right-handed alpha
Helix 6
AA6
B
124 131Right-handed alpha
Helix 7
AA7
B
140 149Right-handed alpha
Helix 8
AA8
B
230 233Right-handed 310
Helix 9
AA9
B
234 251Right-handed alpha
Helix 10
AB1
B
260 264Right-handed 310
Helix 11
AB2
B
265 271Right-handed alpha
Helix 12
AB3
B
280 302Right-handed alpha
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There are 2 sheets in PDB entry 6AUF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
62 64anti-parallel
Strand 3
B
73 75anti-parallel
Strand 4
B
81 84anti-parallel
Strand 5
B
109 113parallel
Strand 6
B
135 139parallel
Strand 7
B
171 173parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 181first strand
Strand 2
B
184 190anti-parallel
Strand 3
B
199 206anti-parallel
Strand 4
B
212 217anti-parallel
Strand 5
B
255 257parallel
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