Analysis of interatomic Contacts of Structural Units in PDB entry:
6AW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AW2 entry

There are 2 chains in PDB entry 6AW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1TYR 107
B
 SER 52LEU 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6AW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
40 42Right-handed 310
Helix 2
AA2
A
79 83Right-handed 310
Helix 3
AA3
B
53 73Right-handed alpha
Helix 4
AA4
B
77 98Right-handed alpha
Helix 5
AA5
B
99 101Right-handed 310
Helix 6
AA6
B
146 150Right-handed 310
Helix 7
AA7
B
159 180Right-handed alpha
Helix 8
AA8
B
219 238Right-handed alpha
Helix 9
AA9
B
268 299Right-handed alpha
Helix 10
AB1
B
317 351Right-handed alpha
Helix 11
AB2
B
387 405Right-handed alpha
Helix 12
AB3
B
405 418Right-handed alpha
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There are 4 sheets in PDB entry 6AW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
17 22anti-parallel
Strand 3
A
73 75anti-parallel
Strand 4
A
65 67anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
97 106parallel
Strand 3
A
84 92anti-parallel
Strand 4
A
28 35anti-parallel
Strand 5
A
44 49anti-parallel
Strand 6
A
55 57anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 217first strand
Strand 2
B
191 201anti-parallel
Strand 3
B
116 120anti-parallel
Strand 4
B
128 132anti-parallel
Strand 5
B
372 374anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
142 143anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il