Analysis of interatomic Contacts of Structural Units in PDB entry:
6AW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AW5 entry

There is 1 chain in PDB entry 6AW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 3SER 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6AW5. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
4 17Right-handed alpha
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
41 46Right-handed alpha
Helix 4
AA4
A
46 58Right-handed alpha
Helix 5
AA5
A
70 78Right-handed alpha
Helix 6
AA6
A
92 107Right-handed alpha
Helix 7
AA7
A
108 110Right-handed 310
Helix 8
AA8
A
118 123Right-handed alpha
Helix 9
AA9
A
124 130Right-handed 310
Helix 10
AB1
A
142 144Right-handed 310
Helix 11
AB2
A
145 156Right-handed alpha
Helix 12
AB3
A
177 185Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6AW5.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
112 116first strand
Strand 2
A
85 90parallel
Strand 3
A
61 65parallel
Strand 4
A
134 139parallel
Strand 5
A
159 168parallel
Strand 6
A
204 211anti-parallel
Strand 7
A
188 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il