Analysis of interatomic Contacts of Structural Units in PDB entry:
6AW8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AW8 entry

There are 3 chains in PDB entry 6AW8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3SER 215
B
 ASP 3PRO 214
C
 ASP 3PRO 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6AW8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 17Right-handed alpha
Helix 2
AA2
A
21 36Right-handed alpha
Helix 3
AA3
A
43 58Right-handed alpha
Helix 4
AA4
A
70 78Right-handed alpha
Helix 5
AA5
A
92 107Right-handed alpha
Helix 6
AA6
A
118 123Right-handed alpha
Helix 7
AA7
A
124 126Right-handed 310
Helix 8
AA8
A
142 144Right-handed 310
Helix 9
AA9
A
145 156Right-handed alpha
Helix 10
AB1
A
175 185Right-handed alpha
Helix 11
AB2
B
4 17Right-handed alpha
Helix 12
AB3
B
21 36Right-handed alpha
Helix 13
AB4
B
42 58Right-handed alpha
Helix 14
AB5
B
70 78Right-handed alpha
Helix 15
AB6
B
92 107Right-handed alpha
Helix 16
AB7
B
108 110Right-handed 310
Helix 17
AB8
B
118 123Right-handed alpha
Helix 18
AB9
B
124 130Right-handed 310
Helix 19
AC1
B
142 144Right-handed 310
Helix 20
AC2
B
145 156Right-handed alpha
Helix 21
AC3
B
175 185Right-handed alpha
Helix 22
AC4
C
4 17Right-handed alpha
Helix 23
AC5
C
21 36Right-handed alpha
Helix 24
AC6
C
42 58Right-handed alpha
Helix 25
AC7
C
70 78Right-handed alpha
Helix 26
AC8
C
92 107Right-handed alpha
Helix 27
AC9
C
118 123Right-handed alpha
Helix 28
AD1
C
124 130Right-handed 310
Helix 29
AD2
C
142 144Right-handed 310
Helix 30
AD3
C
145 156Right-handed alpha
Helix 31
AD4
C
175 185Right-handed alpha
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There are 2 sheets in PDB entry 6AW8. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
85 90parallel
Strand 3
A
61 65parallel
Strand 4
A
134 139parallel
Strand 5
A
159 167parallel
Strand 6
B
188 211anti-parallel
Strand 7
A
188 211anti-parallel
Strand 8
B
159 167anti-parallel
Strand 9
B
134 139parallel
Strand 10
B
61 65parallel
Strand 11
B
85 90parallel
Strand 12
B
112 116parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 116first strand
Strand 2
C
85 90parallel
Strand 3
C
61 65parallel
Strand 4
C
134 139parallel
Strand 5
C
159 167parallel
Strand 6
C
203 211anti-parallel
Strand 7
C
188 196anti-parallel
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