Analysis of interatomic Contacts of Structural Units in PDB entry:
6AX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AX1 entry

There are 2 chains in PDB entry 6AX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 18ALA 297
B
 SER 6THR 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6AX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 57Right-handed 310
Helix 2
AA2
A
58 67Right-handed alpha
Helix 3
AA3
A
93 111Right-handed alpha
Helix 4
AA4
A
123 135Right-handed alpha
Helix 5
AA5
A
157 171Right-handed alpha
Helix 6
AA6
A
180 184Right-handed 310
Helix 7
AA7
A
187 196Right-handed alpha
Helix 8
AA8
A
206 224Right-handed alpha
Helix 9
AA9
A
225 227Right-handed 310
Helix 10
AB1
A
244 254Right-handed alpha
Helix 11
AB2
A
270 274Right-handed 310
Helix 12
AB3
A
275 296Right-handed alpha
Helix 13
AB4
B
15 19Right-handed 310
Helix 14
AB5
B
54 57Right-handed 310
Helix 15
AB6
B
58 67Right-handed alpha
Helix 16
AB7
B
93 111Right-handed alpha
Helix 17
AB8
B
123 135Right-handed alpha
Helix 18
AB9
B
161 167Right-handed alpha
Helix 19
AC1
B
180 184Right-handed 310
Helix 20
AC2
B
187 196Right-handed alpha
Helix 21
AC3
B
206 224Right-handed alpha
Helix 22
AC4
B
225 227Right-handed 310
Helix 23
AC5
B
244 254Right-handed alpha
Helix 24
AC6
B
270 274Right-handed 310
Helix 25
AC7
B
275 296Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6AX1.

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
29 35anti-parallel
Strand 3
A
70 75anti-parallel
Strand 4
A
43 48parallel
Strand 5
A
116 122parallel
Strand 6
A
141 147parallel
Strand 7
A
231 236parallel
Strand 8
A
259 264parallel
Strand 9
B
259 264anti-parallel
Strand 10
B
231 236parallel
Strand 11
B
141 147parallel
Strand 12
B
116 122parallel
Strand 13
B
43 48parallel
Strand 14
B
70 75parallel
Strand 15
B
29 35anti-parallel
Strand 16
B
21 23anti-parallel
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