Analysis of interatomic Contacts of Structural Units in PDB entry:
6AX8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AX8 entry

There is 1 chain in PDB entry 6AX8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 509
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6AX8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 38Right-handed alpha
Helix 2
AA2
A
52 63Right-handed alpha
Helix 3
AA3
A
65 84Right-handed alpha
Helix 4
AA4
A
96 113Right-handed alpha
Helix 5
AA5
A
134 136Right-handed 310
Helix 6
AA6
A
166 168Right-handed 310
Helix 7
AA7
A
169 180Right-handed alpha
Helix 8
AA8
A
186 199Right-handed alpha
Helix 9
AA9
A
226 233Right-handed alpha
Helix 10
AB1
A
233 238Right-handed alpha
Helix 11
AB2
A
246 253Right-handed alpha
Helix 12
AB3
A
264 270Right-handed alpha
Helix 13
AB4
A
270 279Right-handed alpha
Helix 14
AB5
A
309 318Right-handed alpha
Helix 15
AB6
A
318 330Right-handed alpha
Helix 16
AB7
A
339 351Right-handed alpha
Helix 17
AB8
A
355 370Right-handed alpha
Helix 18
AB9
A
381 393Right-handed alpha
Helix 19
AC1
A
393 404Right-handed alpha
Helix 20
AC2
A
406 429Right-handed alpha
Helix 21
AC3
A
429 434Right-handed alpha
Helix 22
AC4
A
438 464Right-handed alpha
Helix 23
AC5
A
467 478Right-handed alpha
Helix 24
AC6
A
488 492Right-handed 310
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There are 5 sheets in PDB entry 6AX8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 93first strand
Strand 2
A
41 48parallel
Strand 3
A
3 8parallel
Strand 4
A
257 261parallel
Strand 5
A
287 290parallel
Strand 6
A
184 185parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
116 126anti-parallel
Strand 3
A
155 164anti-parallel
Strand 4
A
204 205anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 140first strand
Strand 2
A
145 147anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 208first strand
Strand 2
A
220 225anti-parallel
Strand 3
A
216 217anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 294first strand
Strand 2
A
336 337parallel
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