Analysis of interatomic Contacts of Structural Units in PDB entry:
6AZ0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6AZ0 entry

There are 7 chains in PDB entry 6AZ0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 279	THR 717
B	LYS 279	THR 717
C	LYS 279	THR 717
D	LYS 279	THR 717
E	LYS 279	THR 717
F	LYS 279	THR 717
G	UNK 5	UNK 14

There are119 helices in PDB entry 6AZ0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	286	302	Right-handed alpha
Helix 2	AA2	A	303	307	Right-handed 310
Helix 3	AA3	A	326	338	Right-handed alpha
Helix 4	AA4	A	356	373	Right-handed alpha
Helix 5	AA5	A	382	385	Right-handed 310
Helix 6	AA6	A	397	410	Right-handed alpha
Helix 7	AA7	A	425	429	Right-handed 310
Helix 8	AA8	A	430	435	Right-handed 310
Helix 9	AA9	A	449	462	Right-handed alpha
Helix 10	AB1	A	471	479	Right-handed alpha
Helix 11	AB2	A	483	501	Right-handed alpha
Helix 12	AB3	A	507	520	Right-handed alpha
Helix 13	AB4	A	530	548	Right-handed alpha
Helix 14	AB5	A	584	596	Right-handed alpha
Helix 15	AB6	A	596	607	Right-handed alpha
Helix 16	AB7	A	608	611	Right-handed 310
Helix 17	AB8	A	615	632	Right-handed alpha
Helix 18	AB9	A	647	651	Right-handed 310
Helix 19	AC1	A	654	681	Right-handed alpha
Helix 20	AC2	A	681	695	Right-handed alpha
Helix 21	AC3	A	700	708	Right-handed alpha
Helix 22	AC4	B	286	302	Right-handed alpha
Helix 23	AC5	B	303	310	Right-handed 310
Helix 24	AC6	B	326	337	Right-handed alpha
Helix 25	AC7	B	356	373	Right-handed alpha
Helix 26	AC8	B	382	385	Right-handed 310
Helix 27	AC9	B	398	409	Right-handed alpha
Helix 28	AD1	B	449	461	Right-handed alpha
Helix 29	AD2	B	471	478	Right-handed alpha
Helix 30	AD3	B	483	501	Right-handed alpha
Helix 31	AD4	B	507	520	Right-handed alpha
Helix 32	AD5	B	530	548	Right-handed alpha
Helix 33	AD6	B	584	595	Right-handed alpha
Helix 34	AD7	B	596	607	Right-handed alpha
Helix 35	AD8	B	608	611	Right-handed 310
Helix 36	AD9	B	612	614	Right-handed 310
Helix 37	AE1	B	615	631	Right-handed alpha
Helix 38	AE2	B	647	651	Right-handed 310
Helix 39	AE3	B	654	681	Right-handed alpha
Helix 40	AE4	B	681	695	Right-handed alpha
Helix 41	AE5	B	700	708	Right-handed alpha
Helix 42	AE6	C	279	283	Right-handed 310
Helix 43	AE7	C	286	302	Right-handed alpha
Helix 44	AE8	C	303	306	Right-handed 310
Helix 45	AE9	C	326	338	Right-handed alpha
Helix 46	AF1	C	356	373	Right-handed alpha
Helix 47	AF2	C	398	408	Right-handed alpha
Helix 48	AF3	C	425	429	Right-handed 310
Helix 49	AF4	C	449	461	Right-handed alpha
Helix 50	AF5	C	462	464	Right-handed 310
Helix 51	AF6	C	471	479	Right-handed alpha
Helix 52	AF7	C	483	501	Right-handed alpha
Helix 53	AF8	C	507	521	Right-handed alpha
Helix 54	AF9	C	530	550	Right-handed alpha
Helix 55	AG1	C	584	607	Right-handed alpha
Helix 56	AG2	C	608	611	Right-handed 310
Helix 57	AG3	C	614	631	Right-handed alpha
Helix 58	AG4	C	653	681	Right-handed alpha
Helix 59	AG5	C	681	694	Right-handed alpha
Helix 60	AG6	C	699	707	Right-handed alpha
Helix 61	AG7	D	279	283	Right-handed 310
Helix 62	AG8	D	286	302	Right-handed alpha
Helix 63	AG9	D	303	306	Right-handed 310
Helix 64	AH1	D	326	338	Right-handed alpha
Helix 65	AH2	D	356	371	Right-handed alpha
Helix 66	AH3	D	381	386	Right-handed 310
Helix 67	AH4	D	395	397	Right-handed 310
Helix 68	AH5	D	398	409	Right-handed alpha
Helix 69	AH6	D	449	461	Right-handed alpha
Helix 70	AH7	D	471	478	Right-handed alpha
Helix 71	AH8	D	483	501	Right-handed alpha
Helix 72	AH9	D	507	520	Right-handed alpha
Helix 73	AI1	D	530	550	Right-handed alpha
Helix 74	AI2	D	584	595	Right-handed alpha
Helix 75	AI3	D	596	606	Right-handed alpha
Helix 76	AI4	D	607	611	Right-handed 310
Helix 77	AI5	D	614	631	Right-handed alpha
Helix 78	AI6	D	652	679	Right-handed alpha
Helix 79	AI7	D	681	695	Right-handed alpha
Helix 80	AI8	D	699	709	Right-handed alpha
Helix 81	AI9	E	279	283	Right-handed 310
Helix 82	AJ1	E	286	302	Right-handed alpha
Helix 83	AJ2	E	302	307	Right-handed alpha
Helix 84	AJ3	E	327	339	Right-handed alpha
Helix 85	AJ4	E	348	350	Right-handed 310
Helix 86	AJ5	E	358	370	Right-handed alpha
Helix 87	AJ6	E	371	373	Right-handed 310
Helix 88	AJ7	E	382	385	Right-handed 310
Helix 89	AJ8	E	398	410	Right-handed alpha
Helix 90	AJ9	E	449	464	Right-handed alpha
Helix 91	AK1	E	471	479	Right-handed alpha
Helix 92	AK2	E	483	501	Right-handed alpha
Helix 93	AK3	E	507	521	Right-handed alpha
Helix 94	AK4	E	530	551	Right-handed alpha
Helix 95	AK5	E	584	595	Right-handed alpha
Helix 96	AK6	E	596	607	Right-handed alpha
Helix 97	AK7	E	608	611	Right-handed 310
Helix 98	AK8	E	615	631	Right-handed alpha
Helix 99	AK9	E	652	679	Right-handed alpha
Helix 100	AL1	E	681	696	Right-handed alpha
Helix 101	AL2	E	700	707	Right-handed alpha
Helix 102	AL3	F	286	301	Right-handed alpha
Helix 103	AL4	F	302	309	Right-handed alpha
Helix 104	AL5	F	327	338	Right-handed alpha
Helix 105	AL6	F	348	352	Right-handed 310
Helix 106	AL7	F	357	372	Right-handed alpha
Helix 107	AL8	F	390	408	Right-handed alpha
Helix 108	AL9	F	431	435	Right-handed 310
Helix 109	AM1	F	449	462	Right-handed alpha
Helix 110	AM2	F	472	477	Right-handed alpha
Helix 111	AM3	F	484	501	Right-handed alpha
Helix 112	AM4	F	507	519	Right-handed alpha
Helix 113	AM5	F	530	550	Right-handed alpha
Helix 114	AM6	F	584	595	Right-handed alpha
Helix 115	AM7	F	596	607	Right-handed alpha
Helix 116	AM8	F	614	632	Right-handed alpha
Helix 117	AM9	F	652	680	Right-handed alpha
Helix 118	AN1	F	681	696	Right-handed alpha
Helix 119	AN2	F	699	708	Right-handed alpha

There are 12 sheets in PDB entry 6AZ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	342	346	first strand
Strand 2	A	376	380	parallel
Strand 3	A	418	422	parallel
Strand 4	A	316	320	parallel
Strand 5	A	439	444	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	574	first strand
Strand 2	A	557	561	anti-parallel
Strand 3	A	697	699	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	342	346	first strand
Strand 2	B	375	380	parallel
Strand 3	B	417	423	parallel
Strand 4	B	317	320	parallel
Strand 5	B	442	444	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	571	574	first strand
Strand 2	B	557	561	anti-parallel
Strand 3	B	697	699	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	346	first strand
Strand 2	C	375	380	parallel
Strand 3	C	417	423	parallel
Strand 4	C	316	320	parallel
Strand 5	C	441	444	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	557	561	first strand
Strand 2	C	571	574	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	346	first strand
Strand 2	D	376	380	parallel
Strand 3	D	418	423	parallel
Strand 4	D	316	320	parallel
Strand 5	D	441	444	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	557	560	first strand
Strand 2	D	572	574	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	346	first strand
Strand 2	E	376	380	parallel
Strand 3	E	418	423	parallel
Strand 4	E	316	320	parallel
Strand 5	E	441	444	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	573	574	first strand
Strand 2	E	557	561	anti-parallel
Strand 3	E	697	699	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	341	346	first strand
Strand 2	F	375	380	parallel
Strand 3	F	418	422	parallel
Strand 4	F	316	320	parallel
Strand 5	F	442	444	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	572	574	first strand
Strand 2	F	557	561	anti-parallel
Strand 3	F	697	698	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6AZ0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6AZ0