Analysis of interatomic Contacts of Structural Units in PDB entry:
6AZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AZT entry

There are 3 chains in PDB entry 6AZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 58SER 176
A
 HIS 178VAL 337
B
 ALA 1ALA 2
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6AZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
70 72Right-handed 310
Helix 2
AA2
A
73 90Right-handed alpha
Helix 3
AA3
A
93 95Right-handed 310
Helix 4
AA4
A
135 139Right-handed 310
Helix 5
AA5
A
140 150Right-handed alpha
Helix 6
AA6
A
151 155Right-handed 310
Helix 7
AA7
A
194 208Right-handed alpha
Helix 8
AA8
A
221 226Right-handed 310
Helix 9
AA9
A
271 281Right-handed alpha
Helix 10
AB1
A
289 303Right-handed alpha
Helix 11
AB2
A
319 322Right-handed 310
Helix 12
AB3
A
326 331Right-handed alpha
Helix 13
AB4
A
333 337Right-handed 310
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There are 3 sheets in PDB entry 6AZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
60 66parallel
Strand 3
A
170 176parallel
Strand 4
A
212 218parallel
Strand 5
A
236 240parallel
Strand 6
A
314 317anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 180first strand
Strand 2
A
183 184anti-parallel
Strand 3
A
192 193anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 251first strand
Strand 2
A
269 270anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il