Analysis of interatomic Contacts of Structural Units in PDB entry:
6AZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6AZU entry

There are 4 chains in PDB entry 6AZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 12LYS 401
B
 SER 12LYS 401
C
 SER 12LYS 401
D
 SER 12PHE 270
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 92 helices in PDB entry 6AZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 35Right-handed 310
Helix 2
AA2
A
36 44Right-handed alpha
Helix 3
AA3
A
45 52Right-handed alpha
Helix 4
AA4
A
54 61Right-handed alpha
Helix 5
AA5
A
72 93Right-handed alpha
Helix 6
AA6
A
104 119Right-handed alpha
Helix 7
AA7
A
125 130Right-handed alpha
Helix 8
AA8
A
144 146Right-handed 310
Helix 9
AA9
A
159 179Right-handed alpha
Helix 10
AB1
A
180 190Right-handed alpha
Helix 11
AB2
A
192 215Right-handed alpha
Helix 12
AB3
A
216 221Right-handed alpha
Helix 13
AB4
A
222 229Right-handed alpha
Helix 14
AB5
A
229 235Right-handed alpha
Helix 15
AB6
A
240 244Right-handed 310
Helix 16
AB7
A
262 266Right-handed 310
Helix 17
AB8
A
268 278Right-handed alpha
Helix 18
AB9
A
287 297Right-handed alpha
Helix 19
AC1
A
300 312Right-handed alpha
Helix 20
AC2
A
315 322Right-handed alpha
Helix 21
AC3
A
325 354Right-handed alpha
Helix 22
AC4
A
382 397Right-handed alpha
Helix 23
AC5
B
12 16Right-handed 310
Helix 24
AC6
B
33 35Right-handed 310
Helix 25
AC7
B
36 44Right-handed alpha
Helix 26
AC8
B
45 52Right-handed alpha
Helix 27
AC9
B
53 61Right-handed alpha
Helix 28
AD1
B
72 93Right-handed alpha
Helix 29
AD2
B
104 119Right-handed alpha
Helix 30
AD3
B
125 130Right-handed alpha
Helix 31
AD4
B
144 146Right-handed 310
Helix 32
AD5
B
159 179Right-handed alpha
Helix 33
AD6
B
180 190Right-handed alpha
Helix 34
AD7
B
192 215Right-handed alpha
Helix 35
AD8
B
216 221Right-handed alpha
Helix 36
AD9
B
222 229Right-handed alpha
Helix 37
AE1
B
229 235Right-handed alpha
Helix 38
AE2
B
240 244Right-handed 310
Helix 39
AE3
B
262 266Right-handed 310
Helix 40
AE4
B
268 277Right-handed alpha
Helix 41
AE5
B
288 297Right-handed alpha
Helix 42
AE6
B
300 313Right-handed alpha
Helix 43
AE7
B
315 322Right-handed alpha
Helix 44
AE8
B
325 354Right-handed alpha
Helix 45
AE9
B
383 397Right-handed alpha
Helix 46
AF1
C
33 35Right-handed 310
Helix 47
AF2
C
36 45Right-handed alpha
Helix 48
AF3
C
45 52Right-handed alpha
Helix 49
AF4
C
54 61Right-handed alpha
Helix 50
AF5
C
72 93Right-handed alpha
Helix 51
AF6
C
104 118Right-handed alpha
Helix 52
AF7
C
125 130Right-handed alpha
Helix 53
AF8
C
144 146Right-handed 310
Helix 54
AF9
C
159 179Right-handed alpha
Helix 55
AG1
C
180 190Right-handed alpha
Helix 56
AG2
C
192 215Right-handed alpha
Helix 57
AG3
C
216 221Right-handed alpha
Helix 58
AG4
C
222 229Right-handed alpha
Helix 59
AG5
C
229 235Right-handed alpha
Helix 60
AG6
C
240 244Right-handed 310
Helix 61
AG7
C
262 266Right-handed 310
Helix 62
AG8
C
268 277Right-handed alpha
Helix 63
AG9
C
288 296Right-handed alpha
Helix 64
AH1
C
297 299Right-handed 310
Helix 65
AH2
C
300 313Right-handed alpha
Helix 66
AH3
C
315 321Right-handed alpha
Helix 67
AH4
C
325 354Right-handed alpha
Helix 68
AH5
C
354 360Right-handed alpha
Helix 69
AH6
C
382 397Right-handed alpha
Helix 70
AH7
D
33 35Right-handed 310
Helix 71
AH8
D
36 45Right-handed alpha
Helix 72
AH9
D
45 52Right-handed alpha
Helix 73
AI1
D
54 61Right-handed alpha
Helix 74
AI2
D
72 93Right-handed alpha
Helix 75
AI3
D
104 118Right-handed alpha
Helix 76
AI4
D
125 130Right-handed alpha
Helix 77
AI5
D
144 146Right-handed 310
Helix 78
AI6
D
159 179Right-handed alpha
Helix 79
AI7
D
180 190Right-handed alpha
Helix 80
AI8
D
192 215Right-handed alpha
Helix 81
AI9
D
216 221Right-handed alpha
Helix 82
AJ1
D
222 229Right-handed alpha
Helix 83
AJ2
D
229 235Right-handed alpha
Helix 84
AJ3
D
240 244Right-handed 310
Helix 85
AJ4
D
268 278Right-handed alpha
Helix 86
AJ5
D
285 295Right-handed alpha
Helix 87
AJ6
D
296 299Right-handed 310
Helix 88
AJ7
D
300 313Right-handed alpha
Helix 89
AJ8
D
315 322Right-handed alpha
Helix 90
AJ9
D
325 354Right-handed alpha
Helix 91
AK1
D
354 360Right-handed alpha
Helix 92
AK2
D
382 397Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 6AZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
248 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
148 150anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 103first strand
Strand 2
B
248 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
148 149anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
248 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 136first strand
Strand 2
C
148 150anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 103first strand
Strand 2
D
248 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 136first strand
Strand 2
D
148 150anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il