Analysis of interatomic Contacts of Structural Units in PDB entry:
6B04


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B04 entry

There are 3 chains in PDB entry 6B04 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 57HIS 397
B
 LYS 58HIS 397
C
 SER 61HIS 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 6B04. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 64Right-handed alpha
Helix 2
AA2
A
65 76Right-handed alpha
Helix 3
AA3
A
77 81Right-handed 310
Helix 4
AA4
A
82 98Right-handed alpha
Helix 5
AA5
A
102 116Right-handed alpha
Helix 6
AA6
A
117 121Right-handed 310
Helix 7
AA7
A
122 152Right-handed alpha
Helix 8
AA8
A
162 165Right-handed 310
Helix 9
AA9
A
168 170Right-handed 310
Helix 10
AB1
A
171 192Right-handed alpha
Helix 11
AB2
A
196 220Right-handed alpha
Helix 12
AB3
A
221 224Right-handed 310
Helix 13
AB4
A
233 245Right-handed alpha
Helix 14
AB5
A
245 250Right-handed alpha
Helix 15
AB6
A
250 261Right-handed alpha
Helix 16
AB7
A
265 294Right-handed alpha
Helix 17
AB8
A
295 300Right-handed alpha
Helix 18
AB9
A
312 322Right-handed alpha
Helix 19
AC1
A
323 334Right-handed alpha
Helix 20
AC2
A
338 352Right-handed alpha
Helix 21
AC3
A
353 375Right-handed alpha
Helix 22
AC4
A
377 380Right-handed 310
Helix 23
AC5
A
381 393Right-handed alpha
Helix 24
AC6
B
59 64Right-handed alpha
Helix 25
AC7
B
65 76Right-handed alpha
Helix 26
AC8
B
77 81Right-handed 310
Helix 27
AC9
B
82 98Right-handed alpha
Helix 28
AD1
B
102 116Right-handed alpha
Helix 29
AD2
B
117 121Right-handed 310
Helix 30
AD3
B
122 151Right-handed alpha
Helix 31
AD4
B
162 165Right-handed 310
Helix 32
AD5
B
168 170Right-handed 310
Helix 33
AD6
B
171 192Right-handed alpha
Helix 34
AD7
B
196 220Right-handed alpha
Helix 35
AD8
B
233 245Right-handed alpha
Helix 36
AD9
B
245 250Right-handed alpha
Helix 37
AE1
B
250 261Right-handed alpha
Helix 38
AE2
B
265 294Right-handed alpha
Helix 39
AE3
B
295 300Right-handed alpha
Helix 40
AE4
B
312 322Right-handed alpha
Helix 41
AE5
B
323 334Right-handed alpha
Helix 42
AE6
B
338 352Right-handed alpha
Helix 43
AE7
B
353 375Right-handed alpha
Helix 44
AE8
B
376 380Right-handed 310
Helix 45
AE9
B
381 393Right-handed alpha
Helix 46
AF1
C
62 64Right-handed 310
Helix 47
AF2
C
65 76Right-handed alpha
Helix 48
AF3
C
77 81Right-handed 310
Helix 49
AF4
C
82 98Right-handed alpha
Helix 50
AF5
C
102 116Right-handed alpha
Helix 51
AF6
C
117 121Right-handed 310
Helix 52
AF7
C
122 152Right-handed alpha
Helix 53
AF8
C
162 165Right-handed 310
Helix 54
AF9
C
168 170Right-handed 310
Helix 55
AG1
C
171 192Right-handed alpha
Helix 56
AG2
C
196 220Right-handed alpha
Helix 57
AG3
C
233 245Right-handed alpha
Helix 58
AG4
C
245 250Right-handed alpha
Helix 59
AG5
C
250 261Right-handed alpha
Helix 60
AG6
C
265 294Right-handed alpha
Helix 61
AG7
C
295 300Right-handed alpha
Helix 62
AG8
C
312 322Right-handed alpha
Helix 63
AG9
C
323 334Right-handed alpha
Helix 64
AH1
C
338 352Right-handed alpha
Helix 65
AH2
C
353 375Right-handed alpha
Helix 66
AH3
C
376 380Right-handed 310
Helix 67
AH4
C
381 393Right-handed alpha
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There are 3 sheets in PDB entry 6B04. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 156first strand
Strand 2
A
159 160anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 156first strand
Strand 2
B
159 160anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 156first strand
Strand 2
C
159 160anti-parallel
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