Analysis of interatomic Contacts of Structural Units in PDB entry:
6B1F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B1F entry

There are 2 chains in PDB entry 6B1F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22GLY 291
B
 LEU 25GLY 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6B1F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 41Right-handed alpha
Helix 2
AA2
A
70 86Right-handed alpha
Helix 3
AA3
A
88 91Right-handed 310
Helix 4
AA4
A
97 101Right-handed 310
Helix 5
AA5
A
107 111Right-handed 310
Helix 6
AA6
A
118 128Right-handed alpha
Helix 7
AA7
A
130 142Right-handed alpha
Helix 8
AA8
A
142 154Right-handed alpha
Helix 9
AA9
A
166 170Right-handed 310
Helix 10
AB1
A
181 194Right-handed alpha
Helix 11
AB2
A
199 212Right-handed alpha
Helix 12
AB3
A
219 224Right-handed 310
Helix 13
AB4
A
275 289Right-handed alpha
Helix 14
AB5
B
26 41Right-handed alpha
Helix 15
AB6
B
70 84Right-handed alpha
Helix 16
AB7
B
97 101Right-handed 310
Helix 17
AB8
B
105 111Right-handed alpha
Helix 18
AB9
B
118 128Right-handed alpha
Helix 19
AC1
B
130 141Right-handed alpha
Helix 20
AC2
B
143 154Right-handed alpha
Helix 21
AC3
B
166 170Right-handed 310
Helix 22
AC4
B
181 194Right-handed alpha
Helix 23
AC5
B
199 212Right-handed alpha
Helix 24
AC6
B
219 224Right-handed 310
Helix 25
AC7
B
275 289Right-handed alpha
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There are 6 sheets in PDB entry 6B1F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
43 50anti-parallel
Strand 3
A
259 266anti-parallel
Strand 4
A
244 251anti-parallel
Strand 5
A
229 236anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 66first strand
Strand 2
A
179 180anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
116 117anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
43 50anti-parallel
Strand 3
B
259 266anti-parallel
Strand 4
B
244 251anti-parallel
Strand 5
B
229 236anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 66first strand
Strand 2
B
179 180anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 94first strand
Strand 2
B
116 117anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il