Analysis of interatomic Contacts of Structural Units in PDB entry:
6B1P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B1P entry

There is 1 chain in PDB entry 6B1P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LYS 462
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6B1P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 34Right-handed alpha
Helix 2
AA2
A
48 66Right-handed alpha
Helix 3
AA3
A
79 93Right-handed alpha
Helix 4
AA4
A
102 111Right-handed alpha
Helix 5
AA5
A
166 168Right-handed 310
Helix 6
AA6
A
181 193Right-handed alpha
Helix 7
AA7
A
203 205Right-handed 310
Helix 8
AA8
A
206 218Right-handed alpha
Helix 9
AA9
A
247 255Right-handed alpha
Helix 10
AB1
A
257 267Right-handed alpha
Helix 11
AB2
A
279 287Right-handed alpha
Helix 12
AB3
A
288 292Right-handed 310
Helix 13
AB4
A
300 314Right-handed alpha
Helix 14
AB5
A
317 324Right-handed alpha
Helix 15
AB6
A
337 338Right-handed 310
Helix 16
AB7
A
341 341Right-handed 310
Helix 17
AB8
A
342 349Right-handed alpha
Helix 18
AB9
A
353 366Right-handed alpha
Helix 19
AC1
A
372 377Right-handed alpha
Helix 20
AC2
A
380 398Right-handed alpha
Helix 21
AC3
A
420 433Right-handed alpha
Helix 22
AC4
A
440 448Right-handed alpha
Helix 23
AC5
A
449 462Right-handed alpha
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There are 4 sheets in PDB entry 6B1P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
37 42parallel
Strand 3
A
74 75parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
140 143anti-parallel
Strand 3
A
172 174anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 155first strand
Strand 2
A
159 164anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 201first strand
Strand 2
A
224 228parallel
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