Analysis of interatomic Contacts of Structural Units in PDB entry:
6B2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B2E entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 5 chains in PDB entry 6B2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9ARG 171
A
 SER 173ALA 552
B
 PHE 59LYS 107
B
 HIS 109ILE 272
C
 ASN 25LEU 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 6B2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 54Right-handed alpha
Helix 2
AA2
A
57 71Right-handed alpha
Helix 3
AA3
A
101 108Right-handed alpha
Helix 4
AA4
A
112 133Right-handed alpha
Helix 5
AA5
A
157 161Right-handed 310
Helix 6
AA6
A
181 187Right-handed alpha
Helix 7
AA7
A
191 210Right-handed alpha
Helix 8
AA8
A
218 229Right-handed alpha
Helix 9
AA9
A
238 249Right-handed alpha
Helix 10
AB1
A
258 264Right-handed alpha
Helix 11
AB2
A
265 270Right-handed alpha
Helix 12
AB3
A
279 283Right-handed 310
Helix 13
AB4
A
291 302Right-handed alpha
Helix 14
AB5
A
308 315Right-handed alpha
Helix 15
AB6
A
325 338Right-handed alpha
Helix 16
AB7
A
338 343Right-handed alpha
Helix 17
AB8
A
412 427Right-handed alpha
Helix 18
AB9
A
535 551Right-handed alpha
Helix 19
AC1
B
60 70Right-handed alpha
Helix 20
AC2
B
159 170Right-handed alpha
Helix 21
AC3
C
28 33Right-handed alpha
Helix 22
AC4
C
37 42Right-handed 310
Helix 23
AC5
C
56 68Right-handed alpha
Helix 24
AC6
C
87 99Right-handed alpha
Helix 25
AC7
C
106 112Right-handed alpha
Helix 26
AC8
C
113 121Right-handed alpha
Helix 27
AC9
C
137 148Right-handed alpha
Helix 28
AD1
C
168 180Right-handed alpha
Helix 29
AD2
C
181 183Right-handed 310
Helix 30
AD3
C
186 191Right-handed 310
Helix 31
AD4
C
212 223Right-handed alpha
Helix 32
AD5
C
244 246Right-handed 310
Helix 33
AD6
C
247 252Right-handed alpha
Helix 34
AD7
C
261 266Right-handed alpha
Helix 35
AD8
C
284 296Right-handed alpha
Helix 36
AD9
C
315 324Right-handed alpha
Back to top of page

There are 10 sheets in PDB entry 6B2E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
16 24anti-parallel
Strand 3
A
29 35anti-parallel
Strand 4
A
41 48anti-parallel
Strand 5
A
88 94anti-parallel
Strand 6
A
79 84anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 100first strand
Strand 2
A
145 147anti-parallel
Strand 3
A
154 155anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
162 163anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 405first strand
Strand 2
B
242 244anti-parallel
Strand 3
B
250 259anti-parallel
Strand 4
B
262 271anti-parallel
Strand 5
C
45 52parallel
Strand 6
C
72 76parallel
Strand 7
C
81 86anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 409first strand
Strand 2
A
466 472anti-parallel
Strand 3
A
451 459anti-parallel
Strand 4
A
438 444anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
111 113anti-parallel
Strand 3
B
106 107anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 104first strand
Strand 2
B
90 93anti-parallel
Strand 3
B
121 129anti-parallel
Strand 4
B
149 155anti-parallel
Strand 5
B
141 143anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
153 156first strand
Strand 2
C
163 167anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
227 231first strand
Strand 2
C
237 242anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
278 279first strand
Strand 2
C
299 302parallel
Strand 3
C
313 314anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il