Analysis of interatomic Contacts of Structural Units in PDB entry:
6B2U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B2U entry

There is 1 chain in PDB entry 6B2U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 14TRP 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6B2U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 22Right-handed 310
Helix 2
AA2
A
42 57Right-handed alpha
Helix 3
AA3
A
80 97Right-handed alpha
Helix 4
AA4
A
99 103Right-handed 310
Helix 5
AA5
A
119 129Right-handed alpha
Helix 6
AA6
A
141 143Right-handed 310
Helix 7
AA7
A
144 159Right-handed alpha
Helix 8
AA8
A
173 184Right-handed alpha
Helix 9
AA9
A
190 199Right-handed alpha
Helix 10
AB1
A
200 203Right-handed 310
Helix 11
AB2
A
216 218Right-handed 310
Helix 12
AB3
A
233 236Right-handed 310
Helix 13
AB4
A
252 273Right-handed alpha
Helix 14
AB5
A
275 279Right-handed 310
Helix 15
AB6
A
288 300Right-handed alpha
Helix 16
AB7
A
302 306Right-handed 310
Helix 17
AB8
A
309 314Right-handed alpha
Helix 18
AB9
A
316 318Right-handed 310
Helix 19
AC1
A
319 331Right-handed alpha
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There are 3 sheets in PDB entry 6B2U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 35first strand
Strand 2
A
206 214anti-parallel
Strand 3
A
164 171anti-parallel
Strand 4
A
105 108parallel
Strand 5
A
135 138parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
71 74anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 231first strand
Strand 2
A
350 357anti-parallel
Strand 3
A
339 346anti-parallel
Strand 4
A
281 284parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il