Analysis of interatomic Contacts of Structural Units in PDB entry:
6B3A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B3A entry

There is 1 chain in PDB entry 6B3A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -6SER 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6B3A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-3 25Right-handed alpha
Helix 2
AA2
A
25 33Right-handed alpha
Helix 3
AA3
A
38 46Right-handed alpha
Helix 4
AA4
A
48 62Right-handed alpha
Helix 5
AA5
A
77 84Right-handed 310
Helix 6
AA6
A
86 95Right-handed 310
Helix 7
AA7
A
96 102Right-handed alpha
Helix 8
AA8
A
109 118Right-handed alpha
Helix 9
AA9
A
119 122Right-handed 310
Helix 10
AB1
A
124 146Right-handed alpha
Helix 11
AB2
A
160 174Right-handed alpha
Helix 12
AB3
A
187 196Right-handed alpha
Helix 13
AB4
A
197 199Right-handed 310
Helix 14
AB5
A
200 206Right-handed alpha
Helix 15
AB6
A
206 212Right-handed alpha
Helix 16
AB7
A
212 219Right-handed alpha
Helix 17
AB8
A
220 224Right-handed 310
Helix 18
AB9
A
237 249Right-handed alpha
Helix 19
AC1
A
249 255Right-handed alpha
Helix 20
AC2
A
256 266Right-handed alpha
Helix 21
AC3
A
268 272Right-handed 310
Helix 22
AC4
A
284 298Right-handed alpha
Helix 23
AC5
A
299 303Right-handed 310
Helix 24
AC6
A
317 328Right-handed alpha
Helix 25
AC7
A
342 353Right-handed alpha
Helix 26
AC8
A
356 358Right-handed 310
Helix 27
AC9
A
367 371Right-handed 310
Helix 28
AD1
A
378 386Right-handed alpha
Helix 29
AD2
A
403 420Right-handed alpha
Helix 30
AD3
A
436 443Right-handed alpha
Helix 31
AD4
A
448 459Right-handed alpha
Helix 32
AD5
A
465 476Right-handed alpha
Helix 33
AD6
A
482 485Right-handed 310
Helix 34
AD7
A
513 515Right-handed 310
Helix 35
AD8
A
516 522Right-handed alpha
Helix 36
AD9
A
531 542Right-handed alpha
Helix 37
AE1
A
583 602Right-handed alpha
Helix 38
AE2
A
610 620Right-handed alpha
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There are 6 sheets in PDB entry 6B3A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 37first strand
Strand 2
A
72 75anti-parallel
Strand 3
A
65 67anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 337first strand
Strand 2
A
310 315parallel
Strand 3
A
275 279parallel
Strand 4
A
360 365parallel
Strand 5
A
427 432parallel
Strand 6
A
497 504anti-parallel
Strand 7
A
478 480anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 337first strand
Strand 2
A
310 315parallel
Strand 3
A
275 279parallel
Strand 4
A
360 365parallel
Strand 5
A
427 432parallel
Strand 6
A
497 504anti-parallel
Strand 7
A
486 488anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 395first strand
Strand 2
A
401 402anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 511first strand
Strand 2
A
547 551anti-parallel
Strand 3
A
554 564anti-parallel
Strand 4
A
569 577anti-parallel
Strand 5
A
524 525anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 511first strand
Strand 2
A
547 551anti-parallel
Strand 3
A
554 564anti-parallel
Strand 4
A
569 577anti-parallel
Strand 5
A
607 609parallel
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