Analysis of interatomic Contacts of Structural Units in PDB entry:
6B3O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B3O entry

There are 3 chains in PDB entry 6B3O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 741SER 1248
B
 GLN 741SER 1248
C
 GLN 741SER 1248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6B3O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
774 780Right-handed alpha
Helix 2
AA2
A
783 791Right-handed alpha
Helix 3
AA3
A
795 807Right-handed alpha
Helix 4
AA4
A
973 1081Right-handed alpha
Helix 5
AA5
A
1198 1204Right-handed alpha
Helix 6
AA6
A
1220 1224Right-handed 310
Helix 7
AA7
A
1231 1245Right-handed alpha
Helix 8
AA8
B
774 780Right-handed alpha
Helix 9
AA9
B
783 791Right-handed alpha
Helix 10
AB1
B
795 807Right-handed alpha
Helix 11
AB2
B
973 1081Right-handed alpha
Helix 12
AB3
B
1198 1204Right-handed alpha
Helix 13
AB4
B
1220 1224Right-handed 310
Helix 14
AB5
B
1231 1245Right-handed alpha
Helix 15
AB6
C
774 780Right-handed alpha
Helix 16
AB7
C
783 791Right-handed alpha
Helix 17
AB8
C
795 807Right-handed alpha
Helix 18
AB9
C
973 1081Right-handed alpha
Helix 19
AC1
C
1198 1204Right-handed alpha
Helix 20
AC2
C
1220 1224Right-handed 310
Helix 21
AC3
C
1231 1245Right-handed alpha
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There are 9 sheets in PDB entry 6B3O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1097 1106first strand
Strand 2
A
1109 1125anti-parallel
Strand 3
A
749 765anti-parallel
Strand 4
C
1180 1183parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1131 1132first strand
Strand 2
A
1138 1141anti-parallel
Strand 3
A
1171 1174anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1144 1149first strand
Strand 2
A
1152 1157anti-parallel
Strand 3
A
1164 1165anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1180 1183first strand
Strand 2
B
749 765parallel
Strand 3
B
1109 1125anti-parallel
Strand 4
B
1097 1106anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1131 1132first strand
Strand 2
B
1138 1141anti-parallel
Strand 3
B
1171 1174anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1144 1149first strand
Strand 2
B
1152 1157anti-parallel
Strand 3
B
1164 1165anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1180 1183first strand
Strand 2
C
749 765parallel
Strand 3
C
1109 1125anti-parallel
Strand 4
C
1097 1106anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1131 1132first strand
Strand 2
C
1138 1141anti-parallel
Strand 3
C
1171 1174anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1144 1149first strand
Strand 2
C
1152 1157anti-parallel
Strand 3
C
1164 1165anti-parallel
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