Analysis of interatomic Contacts of Structural Units in PDB entry:
6B3P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B3P entry

There are 2 chains in PDB entry 6B3P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 179GLU 387
B
 MET 179GLU 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 6B3P

There are 7 sheets in PDB entry 6B3P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 215first strand
Strand 2
A
222 228anti-parallel
Strand 3
A
180 186anti-parallel
Strand 4
A
260 265parallel
Strand 5
A
269 270anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 212first strand
Strand 2
A
194 198anti-parallel
Strand 3
A
235 240anti-parallel
Strand 4
A
251 253anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 335first strand
Strand 2
A
279 286anti-parallel
Strand 3
A
366 370parallel
Strand 4
A
377 379anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
294 299anti-parallel
Strand 3
A
341 346anti-parallel
Strand 4
A
356 358anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 215first strand
Strand 2
B
222 228anti-parallel
Strand 3
B
180 186anti-parallel
Strand 4
B
260 265parallel
Strand 5
B
269 270anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
211 212first strand
Strand 2
B
194 198anti-parallel
Strand 3
B
235 240anti-parallel
Strand 4
B
251 253anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
356 358first strand
Strand 2
B
341 346anti-parallel
Strand 3
B
294 299anti-parallel
Strand 4
B
317 321anti-parallel
Strand 5
B
328 335anti-parallel
Strand 6
B
279 286anti-parallel
Strand 7
B
366 370parallel
Strand 8
B
377 379anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il