Analysis of interatomic Contacts of Structural Units in PDB entry:
6B44

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B44 entry

There are 12 chains in PDB entry 6B44 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 11	ASP 434
B	VAL 3	VAL 322
C	LEU 6	GLU 338
D	LEU 6	GLU 338
E	ILE 5	GLU 338
F	ILE 5	ALA 339
G	LEU 6	GLU 338
H	LEU 6	GLU 338
L	MET -1	PHE 187
M	C 1	G 60
N	G 3	G 43
O	C 7	A 19

There are 78 helices in PDB entry 6B44. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	28	Right-handed alpha
Helix 2	AA2	A	39	48	Right-handed alpha
Helix 3	AA3	A	51	59	Right-handed alpha
Helix 4	AA4	A	70	74	Right-handed 310
Helix 5	AA5	A	111	115	Right-handed 310
Helix 6	AA6	A	116	123	Right-handed alpha
Helix 7	AA7	A	124	126	Right-handed 310
Helix 8	AA8	A	129	134	Right-handed 310
Helix 9	AA9	A	137	141	Right-handed 310
Helix 10	AB1	A	148	159	Right-handed alpha
Helix 11	AB2	A	195	208	Right-handed alpha
Helix 12	AB3	A	213	224	Right-handed alpha
Helix 13	AB4	A	247	251	Right-handed 310
Helix 14	AB5	A	297	307	Right-handed alpha
Helix 15	AB6	A	317	320	Right-handed 310
Helix 16	AB7	A	321	341	Right-handed alpha
Helix 17	AB8	A	357	363	Right-handed alpha
Helix 18	AB9	A	386	399	Right-handed alpha
Helix 19	AC1	A	402	407	Right-handed alpha
Helix 20	AC2	A	411	429	Right-handed alpha
Helix 21	AC3	B	33	46	Right-handed alpha
Helix 22	AC4	B	116	121	Right-handed alpha
Helix 23	AC5	B	122	135	Right-handed alpha
Helix 24	AC6	B	168	177	Right-handed alpha
Helix 25	AC7	B	178	180	Right-handed 310
Helix 26	AC8	B	190	196	Right-handed alpha
Helix 27	AC9	B	210	214	Right-handed 310
Helix 28	AD1	B	291	295	Right-handed 310
Helix 29	AD2	B	297	301	Right-handed 310
Helix 30	AD3	C	111	128	Right-handed alpha
Helix 31	AD4	C	131	144	Right-handed alpha
Helix 32	AD5	C	191	204	Right-handed alpha
Helix 33	AD6	C	256	264	Right-handed alpha
Helix 34	AD7	C	303	313	Right-handed alpha
Helix 35	AD8	C	322	333	Right-handed alpha
Helix 36	AD9	D	111	127	Right-handed alpha
Helix 37	AE1	D	131	144	Right-handed alpha
Helix 38	AE2	D	189	204	Right-handed alpha
Helix 39	AE3	D	256	265	Right-handed alpha
Helix 40	AE4	D	303	312	Right-handed alpha
Helix 41	AE5	D	321	333	Right-handed alpha
Helix 42	AE6	E	67	72	Right-handed alpha
Helix 43	AE7	E	111	129	Right-handed alpha
Helix 44	AE8	E	131	144	Right-handed alpha
Helix 45	AE9	E	189	204	Right-handed alpha
Helix 46	AF1	E	256	264	Right-handed alpha
Helix 47	AF2	E	274	278	Right-handed 310
Helix 48	AF3	E	283	287	Right-handed 310
Helix 49	AF4	E	303	313	Right-handed alpha
Helix 50	AF5	E	319	333	Right-handed alpha
Helix 51	AF6	F	32	36	Right-handed 310
Helix 52	AF7	F	65	73	Right-handed alpha
Helix 53	AF8	F	111	129	Right-handed alpha
Helix 54	AF9	F	131	144	Right-handed alpha
Helix 55	AG1	F	191	204	Right-handed alpha
Helix 56	AG2	F	256	265	Right-handed alpha
Helix 57	AG3	F	303	313	Right-handed alpha
Helix 58	AG4	F	319	333	Right-handed alpha
Helix 59	AG5	G	35	39	Right-handed 310
Helix 60	AG6	G	66	71	Right-handed alpha
Helix 61	AG7	G	112	127	Right-handed alpha
Helix 62	AG8	G	131	144	Right-handed alpha
Helix 63	AG9	G	189	204	Right-handed alpha
Helix 64	AH1	G	256	265	Right-handed alpha
Helix 65	AH2	G	303	313	Right-handed alpha
Helix 66	AH3	G	319	333	Right-handed alpha
Helix 67	AH4	H	35	39	Right-handed 310
Helix 68	AH5	H	58	62	Right-handed 310
Helix 69	AH6	H	111	129	Right-handed alpha
Helix 70	AH7	H	131	144	Right-handed alpha
Helix 71	AH8	H	189	204	Right-handed alpha
Helix 72	AH9	H	256	265	Right-handed alpha
Helix 73	AI1	H	303	313	Right-handed alpha
Helix 74	AI2	H	319	333	Right-handed alpha
Helix 75	AI3	L	16	30	Right-handed alpha
Helix 76	AI4	L	73	77	Right-handed 310
Helix 77	AI5	L	78	82	Right-handed 310
Helix 78	AI6	L	110	120	Right-handed alpha

There are 38 sheets in PDB entry 6B44. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	66	first strand
Strand 2	A	107	109	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	187	192	anti-parallel
Strand 3	B	277	284	parallel
Strand 4	B	252	257	anti-parallel
Strand 5	B	313	314	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	234	first strand
Strand 2	B	217	219	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	241	first strand
Strand 2	A	262	267	anti-parallel
Strand 3	B	28	30	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	68	first strand
Strand 2	B	102	112	anti-parallel
Strand 3	B	8	21	anti-parallel
Strand 4	B	157	160	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	71	first strand
Strand 2	B	80	81	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	185	188	first strand
Strand 2	B	287	290	anti-parallel
Strand 3	B	248	249	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	305	first strand
Strand 2	B	316	317	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	23	25	first strand
Strand 2	C	253	255	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	47	first strand
Strand 2	C	79	80	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	211	216	anti-parallel
Strand 3	C	159	164	anti-parallel
Strand 4	C	172	173	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	95	96	first strand
Strand 2	C	211	216	anti-parallel
Strand 3	C	159	164	anti-parallel
Strand 4	C	176	177	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	90	99	anti-parallel
Strand 3	D	209	218	anti-parallel
Strand 4	D	158	165	anti-parallel
Strand 5	D	176	177	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	170	172	first strand
Strand 2	D	158	165	anti-parallel
Strand 3	D	209	218	anti-parallel
Strand 4	D	90	99	anti-parallel
Strand 5	D	23	28	anti-parallel
Strand 6	D	252	255	anti-parallel
Strand 7	D	248	249	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	288	first strand
Strand 2	D	293	294	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	209	218	anti-parallel
Strand 4	E	158	165	anti-parallel
Strand 5	E	170	177	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	23	28	anti-parallel
Strand 4	E	254	255	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	44	52	first strand
Strand 2	E	74	83	anti-parallel
Strand 3	E	224	225	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	109	first strand
Strand 2	F	11	14	anti-parallel
Strand 3	F	334	337	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	209	218	anti-parallel
Strand 4	F	157	165	anti-parallel
Strand 5	F	170	173	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	23	28	anti-parallel
Strand 4	F	252	255	anti-parallel
Strand 5	F	248	249	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	51	first strand
Strand 2	F	75	82	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	266	268	first strand
Strand 2	F	280	281	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	287	288	first strand
Strand 2	F	293	294	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	14	first strand
Strand 2	G	334	335	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	209	218	anti-parallel
Strand 4	G	157	165	anti-parallel
Strand 5	G	170	175	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	23	28	anti-parallel
Strand 4	G	252	255	anti-parallel
Strand 5	G	248	249	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	52	first strand
Strand 2	G	74	83	anti-parallel
Strand 3	G	224	225	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	266	268	first strand
Strand 2	G	280	281	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	287	288	first strand
Strand 2	G	293	294	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	109	first strand
Strand 2	H	12	14	anti-parallel
Strand 3	H	334	336	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	20	first strand
Strand 2	H	90	98	anti-parallel
Strand 3	H	210	218	anti-parallel
Strand 4	H	157	165	anti-parallel
Strand 5	H	170	177	anti-parallel

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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	20	first strand
Strand 2	H	90	98	anti-parallel
Strand 3	H	23	28	anti-parallel
Strand 4	H	252	255	anti-parallel
Strand 5	H	248	249	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	52	first strand
Strand 2	H	74	83	anti-parallel
Strand 3	H	224	225	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	266	268	first strand
Strand 2	H	280	281	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	287	288	first strand
Strand 2	H	293	294	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	5	first strand
Strand 2	L	88	89	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	41	42	first strand
Strand 2	L	60	61	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B44

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B44