Analysis of interatomic Contacts of Structural Units in PDB entry:
6B46

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B46 entry

There are 7 chains in PDB entry 6B46 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	LEU 6	GLU 338
D	LEU 6	GLU 338
E	ILE 5	GLU 338
F	ILE 5	ALA 339
G	LEU 6	GLU 338
H	LEU 6	GLU 338
I	SER 0	SER 0

There are 55 helices in PDB entry 6B46. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	32	36	Right-handed 310
Helix 2	AA2	C	112	129	Right-handed alpha
Helix 3	AA3	C	131	144	Right-handed alpha
Helix 4	AA4	C	190	205	Right-handed alpha
Helix 5	AA5	C	256	263	Right-handed alpha
Helix 6	AA6	C	303	313	Right-handed alpha
Helix 7	AA7	C	319	333	Right-handed alpha
Helix 8	AA8	D	32	36	Right-handed 310
Helix 9	AA9	D	65	73	Right-handed alpha
Helix 10	AB1	D	112	129	Right-handed alpha
Helix 11	AB2	D	131	144	Right-handed alpha
Helix 12	AB3	D	189	204	Right-handed alpha
Helix 13	AB4	D	256	265	Right-handed alpha
Helix 14	AB5	D	303	313	Right-handed alpha
Helix 15	AB6	D	319	333	Right-handed alpha
Helix 16	AB7	E	32	36	Right-handed 310
Helix 17	AB8	E	63	72	Right-handed alpha
Helix 18	AB9	E	111	129	Right-handed alpha
Helix 19	AC1	E	131	144	Right-handed alpha
Helix 20	AC2	E	189	205	Right-handed alpha
Helix 21	AC3	E	256	265	Right-handed alpha
Helix 22	AC4	E	283	285	Right-handed 310
Helix 23	AC5	E	303	313	Right-handed alpha
Helix 24	AC6	E	319	333	Right-handed alpha
Helix 25	AC7	F	32	36	Right-handed 310
Helix 26	AC8	F	63	72	Right-handed alpha
Helix 27	AC9	F	112	129	Right-handed alpha
Helix 28	AD1	F	131	144	Right-handed alpha
Helix 29	AD2	F	189	205	Right-handed alpha
Helix 30	AD3	F	256	265	Right-handed alpha
Helix 31	AD4	F	303	312	Right-handed alpha
Helix 32	AD5	F	319	333	Right-handed alpha
Helix 33	AD6	G	63	73	Right-handed alpha
Helix 34	AD7	G	111	129	Right-handed alpha
Helix 35	AD8	G	131	144	Right-handed alpha
Helix 36	AD9	G	189	204	Right-handed alpha
Helix 37	AE1	G	256	265	Right-handed alpha
Helix 38	AE2	G	289	292	Right-handed 310
Helix 39	AE3	G	303	312	Right-handed alpha
Helix 40	AE4	G	319	333	Right-handed alpha
Helix 41	AE5	H	63	72	Right-handed alpha
Helix 42	AE6	H	111	129	Right-handed alpha
Helix 43	AE7	H	132	144	Right-handed alpha
Helix 44	AE8	H	189	204	Right-handed alpha
Helix 45	AE9	H	256	265	Right-handed alpha
Helix 46	AF1	H	304	313	Right-handed alpha
Helix 47	AF2	H	319	333	Right-handed alpha
Helix 48	AF3	I	46	55	Right-handed alpha
Helix 49	AF4	I	61	73	Right-handed alpha
Helix 50	AF5	J	46	55	Right-handed alpha
Helix 51	AF6	J	61	73	Right-handed alpha
Helix 52	AF7	L	16	32	Right-handed alpha
Helix 53	AF8	L	63	69	Right-handed alpha
Helix 54	AF9	L	110	120	Right-handed alpha
Helix 55	AG1	L	123	130	Right-handed alpha

There are 38 sheets in PDB entry 6B46. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	109	first strand
Strand 2	C	12	14	anti-parallel
Strand 3	C	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	90	99	anti-parallel
Strand 3	C	209	216	anti-parallel
Strand 4	C	159	165	anti-parallel
Strand 5	C	170	175	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	90	99	anti-parallel
Strand 3	C	23	28	anti-parallel
Strand 4	C	252	255	anti-parallel
Strand 5	C	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	47	first strand
Strand 2	C	79	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	230	first strand
Strand 2	C	245	246	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	109	first strand
Strand 2	D	12	14	anti-parallel
Strand 3	D	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	90	99	anti-parallel
Strand 3	D	209	218	anti-parallel
Strand 4	D	157	165	anti-parallel
Strand 5	D	170	173	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	90	99	anti-parallel
Strand 3	D	23	28	anti-parallel
Strand 4	D	252	255	anti-parallel
Strand 5	D	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	44	51	first strand
Strand 2	D	75	83	anti-parallel
Strand 3	D	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	268	first strand
Strand 2	D	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	288	first strand
Strand 2	D	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	109	first strand
Strand 2	E	12	14	anti-parallel
Strand 3	E	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	209	218	anti-parallel
Strand 4	E	158	165	anti-parallel
Strand 5	E	170	175	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	23	28	anti-parallel
Strand 4	E	252	255	anti-parallel
Strand 5	E	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	50	first strand
Strand 2	E	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	266	268	first strand
Strand 2	E	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	287	288	first strand
Strand 2	E	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	109	first strand
Strand 2	F	11	14	anti-parallel
Strand 3	F	334	337	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	209	218	anti-parallel
Strand 4	F	158	165	anti-parallel
Strand 5	F	170	175	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	23	28	anti-parallel
Strand 4	F	252	255	anti-parallel
Strand 5	F	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	47	51	first strand
Strand 2	F	75	79	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	266	268	first strand
Strand 2	F	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	109	first strand
Strand 2	G	12	14	anti-parallel
Strand 3	G	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	24	28	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	209	218	anti-parallel
Strand 4	G	157	165	anti-parallel
Strand 5	G	170	175	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	50	first strand
Strand 2	G	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	229	230	first strand
Strand 2	G	245	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	248	249	first strand
Strand 2	G	252	253	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	266	268	first strand
Strand 2	G	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	287	288	first strand
Strand 2	G	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	12	14	first strand
Strand 2	H	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	20	first strand
Strand 2	H	90	99	anti-parallel
Strand 3	H	209	218	anti-parallel
Strand 4	H	157	165	anti-parallel
Strand 5	H	176	177	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	173	first strand
Strand 2	H	157	165	anti-parallel
Strand 3	H	209	218	anti-parallel
Strand 4	H	90	99	anti-parallel
Strand 5	H	23	28	anti-parallel
Strand 6	H	252	255	anti-parallel
Strand 7	H	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	45	51	first strand
Strand 2	H	75	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	266	268	first strand
Strand 2	H	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	2	6	first strand
Strand 2	I	15	21	anti-parallel
Strand 3	I	26	32	anti-parallel
Strand 4	I	38	44	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	2	6	first strand
Strand 2	J	15	21	anti-parallel
Strand 3	J	26	32	anti-parallel
Strand 4	J	38	44	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	7	first strand
Strand 2	L	58	60	anti-parallel
Strand 3	L	42	43	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B46

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B46