Analysis of interatomic Contacts of Structural Units in PDB entry:
6B47

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B47 entry

There are 11 chains in PDB entry 6B47 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 11	ASP 434
B	VAL 3	VAL 322
C	LEU 6	GLU 338
D	LEU 6	GLU 338
E	ILE 5	GLU 338
F	ILE 5	GLU 338
G	LEU 6	GLU 338
H	LEU 6	GLU 338
K	MET 1	VAL 87
L	MET -1	PHE 187
M	C 1	G 60

There are 81 helices in PDB entry 6B47. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	29	Right-handed alpha
Helix 2	AA2	A	34	50	Right-handed alpha
Helix 3	AA3	A	51	59	Right-handed alpha
Helix 4	AA4	A	96	100	Right-handed 310
Helix 5	AA5	A	114	122	Right-handed alpha
Helix 6	AA6	A	137	142	Right-handed alpha
Helix 7	AA7	A	148	161	Right-handed alpha
Helix 8	AA8	A	195	211	Right-handed alpha
Helix 9	AA9	A	213	223	Right-handed alpha
Helix 10	AB1	A	294	307	Right-handed alpha
Helix 11	AB2	A	317	341	Right-handed alpha
Helix 12	AB3	A	358	363	Right-handed alpha
Helix 13	AB4	A	372	382	Right-handed alpha
Helix 14	AB5	A	384	397	Right-handed alpha
Helix 15	AB6	A	402	407	Right-handed alpha
Helix 16	AB7	A	408	434	Right-handed alpha
Helix 17	AB8	B	33	48	Right-handed alpha
Helix 18	AB9	B	115	119	Right-handed 310
Helix 19	AC1	B	122	135	Right-handed alpha
Helix 20	AC2	B	165	177	Right-handed alpha
Helix 21	AC3	B	178	180	Right-handed 310
Helix 22	AC4	B	189	201	Right-handed alpha
Helix 23	AC5	B	206	212	Right-handed alpha
Helix 24	AC6	C	35	39	Right-handed 310
Helix 25	AC7	C	111	129	Right-handed alpha
Helix 26	AC8	C	131	144	Right-handed alpha
Helix 27	AC9	C	189	205	Right-handed alpha
Helix 28	AD1	C	256	265	Right-handed alpha
Helix 29	AD2	C	303	313	Right-handed alpha
Helix 30	AD3	C	319	333	Right-handed alpha
Helix 31	AD4	D	63	73	Right-handed alpha
Helix 32	AD5	D	111	129	Right-handed alpha
Helix 33	AD6	D	131	144	Right-handed alpha
Helix 34	AD7	D	189	204	Right-handed alpha
Helix 35	AD8	D	256	265	Right-handed alpha
Helix 36	AD9	D	303	314	Right-handed alpha
Helix 37	AE1	D	319	333	Right-handed alpha
Helix 38	AE2	E	32	39	Right-handed 310
Helix 39	AE3	E	63	72	Right-handed alpha
Helix 40	AE4	E	112	129	Right-handed alpha
Helix 41	AE5	E	131	144	Right-handed alpha
Helix 42	AE6	E	189	204	Right-handed alpha
Helix 43	AE7	E	256	265	Right-handed alpha
Helix 44	AE8	E	283	285	Right-handed 310
Helix 45	AE9	E	303	313	Right-handed alpha
Helix 46	AF1	E	319	333	Right-handed alpha
Helix 47	AF2	F	32	36	Right-handed 310
Helix 48	AF3	F	63	73	Right-handed alpha
Helix 49	AF4	F	111	129	Right-handed alpha
Helix 50	AF5	F	131	144	Right-handed alpha
Helix 51	AF6	F	190	204	Right-handed alpha
Helix 52	AF7	F	256	265	Right-handed alpha
Helix 53	AF8	F	283	285	Right-handed 310
Helix 54	AF9	F	303	313	Right-handed alpha
Helix 55	AG1	F	319	333	Right-handed alpha
Helix 56	AG2	G	32	36	Right-handed 310
Helix 57	AG3	G	63	72	Right-handed alpha
Helix 58	AG4	G	111	129	Right-handed alpha
Helix 59	AG5	G	131	144	Right-handed alpha
Helix 60	AG6	G	190	205	Right-handed alpha
Helix 61	AG7	G	256	265	Right-handed alpha
Helix 62	AG8	G	303	313	Right-handed alpha
Helix 63	AG9	G	319	333	Right-handed alpha
Helix 64	AH1	H	32	36	Right-handed 310
Helix 65	AH2	H	63	73	Right-handed alpha
Helix 66	AH3	H	111	129	Right-handed alpha
Helix 67	AH4	H	131	144	Right-handed alpha
Helix 68	AH5	H	189	204	Right-handed alpha
Helix 69	AH6	H	256	265	Right-handed alpha
Helix 70	AH7	H	274	278	Right-handed 310
Helix 71	AH8	H	303	313	Right-handed alpha
Helix 72	AH9	H	319	333	Right-handed alpha
Helix 73	AI1	K	9	19	Right-handed alpha
Helix 74	AI2	K	57	68	Right-handed alpha
Helix 75	AI3	K	76	81	Right-handed alpha
Helix 76	AI4	K	81	86	Right-handed alpha
Helix 77	AI5	L	16	32	Right-handed alpha
Helix 78	AI6	L	33	35	Right-handed 310
Helix 79	AI7	L	67	71	Right-handed 310
Helix 80	AI8	L	111	119	Right-handed alpha
Helix 81	AI9	L	123	131	Right-handed alpha

There are 47 sheets in PDB entry 6B47. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	187	192	anti-parallel
Strand 3	B	277	290	parallel
Strand 4	B	185	188	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	181	first strand
Strand 2	A	187	192	anti-parallel
Strand 3	B	277	290	parallel
Strand 4	B	248	257	anti-parallel
Strand 5	B	313	317	anti-parallel
Strand 6	B	304	308	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	232	first strand
Strand 2	B	219	220	anti-parallel
Strand 3	B	240	241	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	241	first strand
Strand 2	A	262	264	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	60	first strand
Strand 2	B	102	113	anti-parallel
Strand 3	B	8	21	anti-parallel
Strand 4	B	143	144	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	68	first strand
Strand 2	B	102	113	anti-parallel
Strand 3	B	8	21	anti-parallel
Strand 4	B	157	159	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	71	first strand
Strand 2	B	80	81	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	109	first strand
Strand 2	C	12	14	anti-parallel
Strand 3	C	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	90	99	anti-parallel
Strand 3	C	24	28	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	19	20	first strand
Strand 2	C	90	99	anti-parallel
Strand 3	C	209	218	anti-parallel
Strand 4	C	158	164	anti-parallel
Strand 5	C	173	175	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	47	first strand
Strand 2	C	79	82	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	230	first strand
Strand 2	C	245	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	248	249	first strand
Strand 2	C	252	253	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	268	first strand
Strand 2	C	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	13	first strand
Strand 2	D	108	109	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	90	98	anti-parallel
Strand 3	D	210	218	anti-parallel
Strand 4	D	158	165	anti-parallel
Strand 5	D	170	175	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	19	20	first strand
Strand 2	D	90	98	anti-parallel
Strand 3	D	23	28	anti-parallel
Strand 4	D	254	255	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	45	51	first strand
Strand 2	D	75	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	229	230	first strand
Strand 2	D	245	246	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	287	288	first strand
Strand 2	D	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	109	first strand
Strand 2	E	12	14	anti-parallel
Strand 3	E	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	209	218	anti-parallel
Strand 4	E	159	165	anti-parallel
Strand 5	E	170	177	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	19	20	first strand
Strand 2	E	90	99	anti-parallel
Strand 3	E	23	28	anti-parallel
Strand 4	E	252	255	anti-parallel
Strand 5	E	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	50	first strand
Strand 2	E	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	266	268	first strand
Strand 2	E	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	287	288	first strand
Strand 2	E	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	109	first strand
Strand 2	F	12	14	anti-parallel
Strand 3	F	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	209	218	anti-parallel
Strand 4	F	157	165	anti-parallel
Strand 5	F	170	177	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	19	20	first strand
Strand 2	F	90	99	anti-parallel
Strand 3	F	23	28	anti-parallel
Strand 4	F	254	255	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	45	50	first strand
Strand 2	F	76	83	anti-parallel
Strand 3	F	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	266	268	first strand
Strand 2	F	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	287	288	first strand
Strand 2	F	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	14	first strand
Strand 2	G	334	336	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	209	218	anti-parallel
Strand 4	G	157	165	anti-parallel
Strand 5	G	170	177	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	19	20	first strand
Strand 2	G	90	99	anti-parallel
Strand 3	G	23	28	anti-parallel
Strand 4	G	252	255	anti-parallel
Strand 5	G	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	50	first strand
Strand 2	G	76	83	anti-parallel
Strand 3	G	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	45	50	first strand
Strand 2	G	76	83	anti-parallel
Strand 3	G	242	244	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	109	first strand
Strand 2	H	11	14	anti-parallel
Strand 3	H	334	337	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	19	20	first strand
Strand 2	H	97	99	anti-parallel
Strand 3	H	209	210	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	170	177	first strand
Strand 2	H	157	165	anti-parallel
Strand 3	H	213	218	anti-parallel
Strand 4	H	90	95	anti-parallel
Strand 5	H	23	28	anti-parallel
Strand 6	H	252	255	anti-parallel
Strand 7	H	248	249	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	50	first strand
Strand 2	H	76	83	anti-parallel
Strand 3	H	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	44	50	first strand
Strand 2	H	76	83	anti-parallel
Strand 3	H	242	244	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	266	268	first strand
Strand 2	H	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	287	288	first strand
Strand 2	H	293	294	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	23	27	first strand
Strand 2	K	31	35	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	41	46	first strand
Strand 2	K	49	54	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	5	6	first strand
Strand 2	L	59	60	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B47

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B47