Analysis of interatomic Contacts of Structural Units in PDB entry:
6B4I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B4I entry

There are 6 chains in PDB entry 6B4I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 384SER 698
C
 ILE 379VAL 423
A
 ASP 384ARG 697
D
 VAL 385VAL 423
E
 ASP 55ASN 479
F
 GLU 54ASN 479
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 6B4I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
384 404Right-handed alpha
Helix 2
AA2
B
412 425Right-handed alpha
Helix 3
AA3
B
427 433Right-handed alpha
Helix 4
AA4
B
437 454Right-handed alpha
Helix 5
AA5
B
472 495Right-handed alpha
Helix 6
AA6
B
498 513Right-handed alpha
Helix 7
AA7
B
513 528Right-handed alpha
Helix 8
AA8
B
529 532Right-handed 310
Helix 9
AA9
B
543 551Right-handed alpha
Helix 10
AB1
B
562 581Right-handed alpha
Helix 11
AB2
B
598 610Right-handed alpha
Helix 12
AB3
B
615 637Right-handed alpha
Helix 13
AB4
B
637 649Right-handed alpha
Helix 14
AB5
B
653 658Right-handed alpha
Helix 15
AB6
B
661 664Right-handed 310
Helix 16
AB7
B
665 682Right-handed alpha
Helix 17
AB8
B
692 698Right-handed alpha
Helix 18
AB9
C
394 403Right-handed alpha
Helix 19
AC1
A
385 404Right-handed alpha
Helix 20
AC2
A
412 425Right-handed alpha
Helix 21
AC3
A
427 433Right-handed alpha
Helix 22
AC4
A
437 454Right-handed alpha
Helix 23
AC5
A
472 495Right-handed alpha
Helix 24
AC6
A
498 513Right-handed alpha
Helix 25
AC7
A
513 528Right-handed alpha
Helix 26
AC8
A
529 532Right-handed 310
Helix 27
AC9
A
543 552Right-handed alpha
Helix 28
AD1
A
563 581Right-handed alpha
Helix 29
AD2
A
598 610Right-handed alpha
Helix 30
AD3
A
615 637Right-handed alpha
Helix 31
AD4
A
637 649Right-handed alpha
Helix 32
AD5
A
653 658Right-handed alpha
Helix 33
AD6
A
661 664Right-handed 310
Helix 34
AD7
A
665 682Right-handed alpha
Helix 35
AD8
A
692 697Right-handed alpha
Helix 36
AD9
D
394 403Right-handed alpha
Helix 37
AE1
E
56 67Right-handed alpha
Helix 38
AE2
E
100 110Right-handed alpha
Helix 39
AE3
E
116 128Right-handed alpha
Helix 40
AE4
E
143 156Right-handed alpha
Helix 41
AE5
E
171 186Right-handed alpha
Helix 42
AE6
E
217 226Right-handed alpha
Helix 43
AE7
E
232 236Right-handed 310
Helix 44
AE8
E
243 248Right-handed alpha
Helix 45
AE9
E
250 263Right-handed alpha
Helix 46
AF1
E
278 289Right-handed alpha
Helix 47
AF2
E
316 331Right-handed alpha
Helix 48
AF3
E
342 356Right-handed alpha
Helix 49
AF4
E
368 381Right-handed alpha
Helix 50
AF5
E
413 417Right-handed 310
Helix 51
AF6
E
419 429Right-handed alpha
Helix 52
AF7
E
445 460Right-handed alpha
Helix 53
AF8
E
470 478Right-handed alpha
Helix 54
AF9
F
55 67Right-handed alpha
Helix 55
AG1
F
100 110Right-handed alpha
Helix 56
AG2
F
118 128Right-handed alpha
Helix 57
AG3
F
143 156Right-handed alpha
Helix 58
AG4
F
171 186Right-handed alpha
Helix 59
AG5
F
217 227Right-handed alpha
Helix 60
AG6
F
232 236Right-handed 310
Helix 61
AG7
F
243 248Right-handed alpha
Helix 62
AG8
F
250 263Right-handed alpha
Helix 63
AG9
F
278 289Right-handed alpha
Helix 64
AH1
F
316 328Right-handed alpha
Helix 65
AH2
F
342 356Right-handed alpha
Helix 66
AH3
F
368 381Right-handed alpha
Helix 67
AH4
F
413 417Right-handed 310
Helix 68
AH5
F
419 429Right-handed alpha
Helix 69
AH6
F
431 435Right-handed 310
Helix 70
AH7
F
445 460Right-handed alpha
Helix 71
AH8
F
470 478Right-handed alpha
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There are 4 sheets in PDB entry 6B4I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
78 80first strand
Strand 2
E
293 297anti-parallel
Strand 3
E
134 138parallel
Strand 4
E
269 274parallel
Strand 5
E
238 241parallel
Strand 6
E
165 168parallel
Strand 7
E
213 216parallel
Strand 8
E
194 197parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
361 363first strand
Strand 2
E
386 389parallel
Strand 3
E
335 339parallel
Strand 4
E
402 407parallel
Strand 5
E
437 443parallel
Strand 6
E
307 313parallel
Strand 7
E
464 465parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
78 80first strand
Strand 2
F
293 297anti-parallel
Strand 3
F
134 138parallel
Strand 4
F
269 274parallel
Strand 5
F
238 241parallel
Strand 6
F
165 168parallel
Strand 7
F
213 216parallel
Strand 8
F
194 197parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
361 363first strand
Strand 2
F
386 389parallel
Strand 3
F
335 339parallel
Strand 4
F
402 407parallel
Strand 5
F
437 443parallel
Strand 6
F
307 313parallel
Strand 7
F
463 465parallel
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