Analysis of interatomic Contacts of Structural Units in PDB entry:
6B4M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B4M entry

There are 2 chains in PDB entry 6B4M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 19TYR 361
B
 HIS 18TYR 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6B4M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
40 44Right-handed 310
Helix 3
AA3
A
57 77Right-handed alpha
Helix 4
AA4
A
80 84Right-handed 310
Helix 5
AA5
A
88 101Right-handed alpha
Helix 6
AA6
A
127 148Right-handed alpha
Helix 7
AA7
A
172 180Right-handed alpha
Helix 8
AA8
A
180 201Right-handed alpha
Helix 9
AA9
A
205 229Right-handed alpha
Helix 10
AB1
A
230 235Right-handed 310
Helix 11
AB2
A
236 256Right-handed alpha
Helix 12
AB3
A
261 271Right-handed alpha
Helix 13
AB4
A
290 310Right-handed alpha
Helix 14
AB5
A
312 322Right-handed alpha
Helix 15
AB6
A
324 340Right-handed alpha
Helix 16
AB7
A
345 353Right-handed alpha
Helix 17
AB8
B
33 37Right-handed 310
Helix 18
AB9
B
40 44Right-handed 310
Helix 19
AC1
B
57 72Right-handed alpha
Helix 20
AC2
B
72 77Right-handed alpha
Helix 21
AC3
B
78 84Right-handed 310
Helix 22
AC4
B
88 101Right-handed alpha
Helix 23
AC5
B
127 148Right-handed alpha
Helix 24
AC6
B
172 180Right-handed alpha
Helix 25
AC7
B
180 197Right-handed alpha
Helix 26
AC8
B
205 229Right-handed alpha
Helix 27
AC9
B
230 235Right-handed 310
Helix 28
AD1
B
236 256Right-handed alpha
Helix 29
AD2
B
261 271Right-handed alpha
Helix 30
AD3
B
290 310Right-handed alpha
Helix 31
AD4
B
312 322Right-handed alpha
Helix 32
AD5
B
324 340Right-handed alpha
Helix 33
AD6
B
345 353Right-handed alpha
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There are 2 sheets in PDB entry 6B4M. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
50 53anti-parallel
Strand 3
A
156 159parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 53first strand
Strand 2
B
156 159parallel
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