Analysis of interatomic Contacts of Structural Units in PDB entry:
6B53


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B53 entry

There are 2 chains in PDB entry 6B53 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 21ILE 266
B
 THR 21ILE 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6B53. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 47Right-handed alpha
Helix 2
AA2
A
52 59Right-handed alpha
Helix 3
AA3
A
62 74Right-handed alpha
Helix 4
AA4
A
80 92Right-handed alpha
Helix 5
AA5
A
102 105Right-handed 310
Helix 6
AA6
A
106 114Right-handed alpha
Helix 7
AA7
A
125 137Right-handed alpha
Helix 8
AA8
A
143 156Right-handed alpha
Helix 9
AA9
A
159 174Right-handed alpha
Helix 10
AB1
A
183 202Right-handed alpha
Helix 11
AB2
A
203 205Right-handed 310
Helix 12
AB3
A
215 223Right-handed alpha
Helix 13
AB4
A
238 253Right-handed alpha
Helix 14
AB5
A
254 259Right-handed alpha
Helix 15
AB6
A
260 262Right-handed 310
Helix 16
AB7
B
34 47Right-handed alpha
Helix 17
AB8
B
52 59Right-handed alpha
Helix 18
AB9
B
62 75Right-handed alpha
Helix 19
AC1
B
80 92Right-handed alpha
Helix 20
AC2
B
102 105Right-handed 310
Helix 21
AC3
B
106 114Right-handed alpha
Helix 22
AC4
B
125 137Right-handed alpha
Helix 23
AC5
B
143 157Right-handed alpha
Helix 24
AC6
B
159 174Right-handed alpha
Helix 25
AC7
B
183 202Right-handed alpha
Helix 26
AC8
B
203 205Right-handed 310
Helix 27
AC9
B
215 223Right-handed alpha
Helix 28
AD1
B
238 253Right-handed alpha
Helix 29
AD2
B
254 259Right-handed alpha
Helix 30
AD3
B
260 262Right-handed 310
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There are 2 sheets in PDB entry 6B53. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
97 98parallel
Strand 3
A
25 27parallel
Strand 4
A
118 123parallel
Strand 5
A
207 211parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
97 98parallel
Strand 3
B
25 27parallel
Strand 4
B
118 123parallel
Strand 5
B
207 211parallel
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