Analysis of interatomic Contacts of Structural Units in PDB entry:
6B58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B58 entry

There are 6 chains in PDB entry 6B58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0ALA 576
B
 LYS 6ALA 7
B
 ILE 9GLY 84
C
 MET 0ALA 576
D
 ALA 7ALA 7
D
 ILE 9GLY 84
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6B58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 27Right-handed alpha
Helix 2
AA2
A
39 48Right-handed 310
Helix 3
AA3
A
61 73Right-handed alpha
Helix 4
AA4
A
78 99Right-handed alpha
Helix 5
AA5
A
131 145Right-handed alpha
Helix 6
AA6
A
195 199Right-handed 310
Helix 7
AA7
A
210 219Right-handed alpha
Helix 8
AA8
A
245 250Right-handed alpha
Helix 9
AA9
A
261 266Right-handed 310
Helix 10
AB1
A
281 285Right-handed 310
Helix 11
AB2
A
286 300Right-handed alpha
Helix 12
AB3
A
320 327Right-handed alpha
Helix 13
AB4
A
330 339Right-handed alpha
Helix 14
AB5
A
393 415Right-handed alpha
Helix 15
AB6
A
421 440Right-handed alpha
Helix 16
AB7
A
447 463Right-handed alpha
Helix 17
AB8
A
468 487Right-handed alpha
Helix 18
AB9
A
499 525Right-handed alpha
Helix 19
AC1
B
10 14Right-handed 310
Helix 20
AC2
B
17 31Right-handed alpha
Helix 21
AC3
B
36 38Right-handed 310
Helix 22
AC4
B
39 48Right-handed alpha
Helix 23
AC5
B
50 57Right-handed alpha
Helix 24
AC6
B
66 81Right-handed alpha
Helix 25
AC7
C
13 27Right-handed alpha
Helix 26
AC8
C
39 48Right-handed 310
Helix 27
AC9
C
61 72Right-handed alpha
Helix 28
AD1
C
78 99Right-handed alpha
Helix 29
AD2
C
131 144Right-handed alpha
Helix 30
AD3
C
195 199Right-handed 310
Helix 31
AD4
C
210 218Right-handed alpha
Helix 32
AD5
C
245 250Right-handed alpha
Helix 33
AD6
C
261 267Right-handed 310
Helix 34
AD7
C
281 285Right-handed 310
Helix 35
AD8
C
286 300Right-handed alpha
Helix 36
AD9
C
316 318Right-handed 310
Helix 37
AE1
C
319 327Right-handed alpha
Helix 38
AE2
C
329 339Right-handed alpha
Helix 39
AE3
C
393 416Right-handed alpha
Helix 40
AE4
C
421 440Right-handed alpha
Helix 41
AE5
C
447 463Right-handed alpha
Helix 42
AE6
C
468 487Right-handed alpha
Helix 43
AE7
C
500 525Right-handed alpha
Helix 44
AE8
C
543 548Right-handed alpha
Helix 45
AE9
D
9 14Right-handed 310
Helix 46
AF1
D
17 24Right-handed alpha
Helix 47
AF2
D
24 32Right-handed alpha
Helix 48
AF3
D
39 48Right-handed alpha
Helix 49
AF4
D
50 59Right-handed alpha
Helix 50
AF5
D
66 82Right-handed alpha
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There are 10 sheets in PDB entry 6B58. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 4first strand
Strand 2
A
180 184parallel
Strand 3
A
167 174anti-parallel
Strand 4
A
155 162anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 153first strand
Strand 2
A
32 36parallel
Strand 3
A
7 10parallel
Strand 4
A
187 190parallel
Strand 5
A
374 376parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
381 382first strand
Strand 2
A
360 362parallel
Strand 3
A
223 224anti-parallel
Strand 4
A
550 555anti-parallel
Strand 5
A
561 566anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 235first strand
Strand 2
A
348 357anti-parallel
Strand 3
A
309 315anti-parallel
Strand 4
A
253 255anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 235first strand
Strand 2
A
348 357anti-parallel
Strand 3
A
309 315anti-parallel
Strand 4
A
304 306anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
466 467first strand
Strand 2
A
533 534parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1 4first strand
Strand 2
C
180 184parallel
Strand 3
C
166 174anti-parallel
Strand 4
C
155 163anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
149 153first strand
Strand 2
C
32 36parallel
Strand 3
C
7 10parallel
Strand 4
C
187 190parallel
Strand 5
C
374 376parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
381 382first strand
Strand 2
C
360 362parallel
Strand 3
C
223 224anti-parallel
Strand 4
C
549 555anti-parallel
Strand 5
C
561 567anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 235first strand
Strand 2
C
348 357anti-parallel
Strand 3
C
312 315anti-parallel
Strand 4
C
253 255anti-parallel
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