Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B5D entry

There is 1 chain in PDB entry 6B5D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 164SER 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6B5D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
174 181Right-handed alpha
Helix 2
AA2
A
191 195Right-handed 310
Helix 3
AA3
A
198 209Right-handed alpha
Helix 4
AA4
A
209 215Right-handed alpha
Helix 5
AA5
A
220 224Right-handed 310
Helix 6
AA6
A
238 250Right-handed alpha
Helix 7
AA7
A
259 265Right-handed alpha
Helix 8
AA8
A
271 284Right-handed alpha
Helix 9
AA9
A
294 297Right-handed 310
Helix 10
AB1
A
310 315Right-handed alpha
Helix 11
AB2
A
315 325Right-handed alpha
Helix 12
AB3
A
346 353Right-handed alpha
Helix 13
AB4
A
363 375Right-handed alpha
Helix 14
AB5
A
385 393Right-handed alpha
Helix 15
AB6
A
397 415Right-handed alpha
Helix 16
AB7
A
418 422Right-handed 310
Helix 17
AB8
A
427 436Right-handed alpha
Helix 18
AB9
A
439 450Right-handed alpha
Helix 19
AC1
A
455 466Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6B5D.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
253 258anti-parallel
Strand 3
A
287 292parallel
Strand 4
A
333 339parallel
Strand 5
A
228 232parallel
Strand 6
A
355 358parallel
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