Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B5F entry

There are 2 chains in PDB entry 6B5F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN -1GLU 342
B
 GLY 0LEU 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6B5F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 10Right-handed alpha
Helix 2
AA2
A
15 28Right-handed alpha
Helix 3
AA3
A
36 48Right-handed alpha
Helix 4
AA4
A
69 75Right-handed 310
Helix 5
AA5
A
82 94Right-handed alpha
Helix 6
AA6
A
96 105Right-handed alpha
Helix 7
AA7
A
143 164Right-handed alpha
Helix 8
AA8
A
178 191Right-handed alpha
Helix 9
AA9
A
193 198Right-handed alpha
Helix 10
AB1
A
205 207Right-handed 310
Helix 11
AB2
A
208 224Right-handed alpha
Helix 12
AB3
A
229 238Right-handed alpha
Helix 13
AB4
A
239 256Right-handed alpha
Helix 14
AB5
A
263 277Right-handed alpha
Helix 15
AB6
A
278 282Right-handed 310
Helix 16
AB7
A
294 303Right-handed alpha
Helix 17
AB8
A
317 337Right-handed alpha
Helix 18
AB9
B
3 10Right-handed alpha
Helix 19
AC1
B
15 28Right-handed alpha
Helix 20
AC2
B
36 48Right-handed alpha
Helix 21
AC3
B
69 75Right-handed 310
Helix 22
AC4
B
82 94Right-handed alpha
Helix 23
AC5
B
96 106Right-handed alpha
Helix 24
AC6
B
143 164Right-handed alpha
Helix 25
AC7
B
178 191Right-handed alpha
Helix 26
AC8
B
193 198Right-handed alpha
Helix 27
AC9
B
206 224Right-handed alpha
Helix 28
AD1
B
229 238Right-handed alpha
Helix 29
AD2
B
239 256Right-handed alpha
Helix 30
AD3
B
263 277Right-handed alpha
Helix 31
AD4
B
278 282Right-handed 310
Helix 32
AD5
B
294 303Right-handed alpha
Helix 33
AD6
B
317 337Right-handed alpha
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There are 2 sheets in PDB entry 6B5F. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 126first strand
Strand 2
A
107 115parallel
Strand 3
A
60 67parallel
Strand 4
A
168 174parallel
Strand 5
A
259 260parallel
Strand 6
A
284 285parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 126first strand
Strand 2
B
107 115parallel
Strand 3
B
60 67parallel
Strand 4
B
168 174parallel
Strand 5
B
259 260parallel
Strand 6
B
284 285parallel
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