Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B5G entry

There are 4 chains in PDB entry 6B5G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 27	SER 518
B	PRO 27	SER 518
C	PRO 27	SER 518
D	PRO 27	SER 518

There are 79 helices in PDB entry 6B5G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	89	Right-handed alpha
Helix 2	AA2	A	92	97	Right-handed alpha
Helix 3	AA3	A	98	116	Right-handed alpha
Helix 4	AA4	A	116	129	Right-handed alpha
Helix 5	AA5	A	131	138	Right-handed alpha
Helix 6	AA6	A	138	154	Right-handed alpha
Helix 7	AA7	A	155	157	Right-handed 310
Helix 8	AA8	A	188	203	Right-handed alpha
Helix 9	AA9	A	216	230	Right-handed alpha
Helix 10	AB1	A	245	253	Right-handed alpha
Helix 11	AB2	A	264	278	Right-handed alpha
Helix 12	AB3	A	300	314	Right-handed alpha
Helix 13	AB4	A	315	318	Right-handed 310
Helix 14	AB5	A	330	347	Right-handed alpha
Helix 15	AB6	A	364	380	Right-handed alpha
Helix 16	AB7	A	411	416	Right-handed alpha
Helix 17	AB8	A	430	440	Right-handed alpha
Helix 18	AB9	A	453	464	Right-handed alpha
Helix 19	AC1	A	495	501	Right-handed alpha
Helix 20	AC2	B	73	88	Right-handed alpha
Helix 21	AC3	B	92	97	Right-handed alpha
Helix 22	AC4	B	98	116	Right-handed alpha
Helix 23	AC5	B	116	129	Right-handed alpha
Helix 24	AC6	B	131	138	Right-handed alpha
Helix 25	AC7	B	138	154	Right-handed alpha
Helix 26	AC8	B	155	157	Right-handed 310
Helix 27	AC9	B	188	203	Right-handed alpha
Helix 28	AD1	B	216	230	Right-handed alpha
Helix 29	AD2	B	245	252	Right-handed alpha
Helix 30	AD3	B	264	278	Right-handed alpha
Helix 31	AD4	B	300	314	Right-handed alpha
Helix 32	AD5	B	315	318	Right-handed 310
Helix 33	AD6	B	330	347	Right-handed alpha
Helix 34	AD7	B	364	382	Right-handed alpha
Helix 35	AD8	B	411	416	Right-handed alpha
Helix 36	AD9	B	430	440	Right-handed alpha
Helix 37	AE1	B	453	464	Right-handed alpha
Helix 38	AE2	B	486	488	Right-handed 310
Helix 39	AE3	B	495	502	Right-handed alpha
Helix 40	AE4	C	73	88	Right-handed alpha
Helix 41	AE5	C	92	97	Right-handed alpha
Helix 42	AE6	C	98	116	Right-handed alpha
Helix 43	AE7	C	116	129	Right-handed alpha
Helix 44	AE8	C	131	138	Right-handed alpha
Helix 45	AE9	C	138	154	Right-handed alpha
Helix 46	AF1	C	155	157	Right-handed 310
Helix 47	AF2	C	188	203	Right-handed alpha
Helix 48	AF3	C	216	230	Right-handed alpha
Helix 49	AF4	C	245	253	Right-handed alpha
Helix 50	AF5	C	264	279	Right-handed alpha
Helix 51	AF6	C	300	314	Right-handed alpha
Helix 52	AF7	C	315	318	Right-handed 310
Helix 53	AF8	C	330	346	Right-handed alpha
Helix 54	AF9	C	364	381	Right-handed alpha
Helix 55	AG1	C	411	415	Right-handed 310
Helix 56	AG2	C	430	440	Right-handed alpha
Helix 57	AG3	C	453	464	Right-handed alpha
Helix 58	AG4	C	486	488	Right-handed 310
Helix 59	AG5	C	495	500	Right-handed alpha
Helix 60	AG6	D	73	88	Right-handed alpha
Helix 61	AG7	D	92	97	Right-handed alpha
Helix 62	AG8	D	98	116	Right-handed alpha
Helix 63	AG9	D	116	129	Right-handed alpha
Helix 64	AH1	D	131	138	Right-handed alpha
Helix 65	AH2	D	138	154	Right-handed alpha
Helix 66	AH3	D	155	157	Right-handed 310
Helix 67	AH4	D	188	203	Right-handed alpha
Helix 68	AH5	D	216	230	Right-handed alpha
Helix 69	AH6	D	242	252	Right-handed alpha
Helix 70	AH7	D	264	278	Right-handed alpha
Helix 71	AH8	D	300	314	Right-handed alpha
Helix 72	AH9	D	315	318	Right-handed 310
Helix 73	AI1	D	330	346	Right-handed alpha
Helix 74	AI2	D	364	381	Right-handed alpha
Helix 75	AI3	D	411	416	Right-handed alpha
Helix 76	AI4	D	430	440	Right-handed alpha
Helix 77	AI5	D	453	464	Right-handed alpha
Helix 78	AI6	D	486	488	Right-handed 310
Helix 79	AI7	D	497	502	Right-handed 310

There are 16 sheets in PDB entry 6B5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	45	47	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	65	70	anti-parallel

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There are 20 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	384	387	first strand
Strand 2	C	402	405	anti-parallel
Strand 3	C	422	428	parallel
Strand 4	C	325	329	parallel
Strand 5	C	292	295	parallel
Strand 6	C	446	450	parallel
Strand 7	C	468	471	parallel
Strand 8	A	504	512	parallel
Strand 9	A	168	176	anti-parallel
Strand 10	A	159	162	anti-parallel
Strand 11	B	159	162	anti-parallel
Strand 12	B	168	176	anti-parallel
Strand 13	B	504	512	anti-parallel
Strand 14	D	468	471	parallel
Strand 15	D	446	450	parallel
Strand 16	D	292	295	parallel
Strand 17	D	325	329	parallel
Strand 18	D	422	428	parallel
Strand 19	D	402	404	parallel
Strand 20	D	385	387	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	238	first strand
Strand 2	A	206	210	parallel
Strand 3	A	179	183	parallel
Strand 4	A	258	262	parallel
Strand 5	A	282	286	parallel
Strand 6	A	490	491	anti-parallel

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There are 20 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	387	first strand
Strand 2	A	402	405	anti-parallel
Strand 3	A	422	428	parallel
Strand 4	A	325	329	parallel
Strand 5	A	292	295	parallel
Strand 6	A	446	450	parallel
Strand 7	A	468	471	parallel
Strand 8	C	504	512	parallel
Strand 9	C	168	176	anti-parallel
Strand 10	C	159	162	anti-parallel
Strand 11	D	159	162	anti-parallel
Strand 12	D	168	176	anti-parallel
Strand 13	D	504	512	anti-parallel
Strand 14	B	468	471	parallel
Strand 15	B	447	450	parallel
Strand 16	B	292	295	parallel
Strand 17	B	325	329	parallel
Strand 18	B	422	428	parallel
Strand 19	B	402	405	parallel
Strand 20	B	384	387	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	398	399	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	444	first strand
Strand 2	A	486	487	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	42	first strand
Strand 2	B	45	47	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	58	first strand
Strand 2	B	65	70	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	238	first strand
Strand 2	B	206	210	parallel
Strand 3	B	179	183	parallel
Strand 4	B	258	262	parallel
Strand 5	B	282	286	parallel
Strand 6	B	490	491	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	45	47	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	65	70	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	238	first strand
Strand 2	C	206	210	parallel
Strand 3	C	179	183	parallel
Strand 4	C	258	262	parallel
Strand 5	C	282	286	parallel
Strand 6	C	490	491	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	45	47	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	58	first strand
Strand 2	D	65	70	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	238	first strand
Strand 2	D	206	210	parallel
Strand 3	D	179	183	parallel
Strand 4	D	258	262	parallel
Strand 5	D	282	286	parallel
Strand 6	D	490	491	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B5G

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5G