Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B5K entry

There are 2 chains in PDB entry 6B5K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 286
B
 MET 1GLU 286
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6B5K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 15Right-handed 310
Helix 2
AA2
A
16 21Right-handed alpha
Helix 3
AA3
A
22 26Right-handed 310
Helix 4
AA4
A
34 44Right-handed alpha
Helix 5
AA5
A
57 66Right-handed alpha
Helix 6
AA6
A
68 72Right-handed 310
Helix 7
AA7
A
87 93Right-handed alpha
Helix 8
AA8
A
93 98Right-handed alpha
Helix 9
AA9
A
117 126Right-handed 310
Helix 10
AB1
A
138 141Right-handed 310
Helix 11
AB2
A
178 185Right-handed alpha
Helix 12
AB3
A
195 206Right-handed alpha
Helix 13
AB4
A
225 244Right-handed alpha
Helix 14
AB5
A
249 257Right-handed alpha
Helix 15
AB6
A
261 272Right-handed alpha
Helix 16
AB7
A
276 286Right-handed alpha
Helix 17
AB8
B
11 15Right-handed 310
Helix 18
AB9
B
16 21Right-handed alpha
Helix 19
AC1
B
22 26Right-handed 310
Helix 20
AC2
B
34 44Right-handed alpha
Helix 21
AC3
B
57 66Right-handed alpha
Helix 22
AC4
B
68 72Right-handed 310
Helix 23
AC5
B
85 87Right-handed 310
Helix 24
AC6
B
88 93Right-handed alpha
Helix 25
AC7
B
93 98Right-handed alpha
Helix 26
AC8
B
117 124Right-handed 310
Helix 27
AC9
B
138 142Right-handed 310
Helix 28
AD1
B
178 186Right-handed alpha
Helix 29
AD2
B
195 205Right-handed alpha
Helix 30
AD3
B
225 244Right-handed alpha
Helix 31
AD4
B
249 257Right-handed alpha
Helix 32
AD5
B
261 272Right-handed alpha
Helix 33
AD6
B
276 285Right-handed alpha
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There are 6 sheets in PDB entry 6B5K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
48 53parallel
Strand 3
A
2 6parallel
Strand 4
A
102 106parallel
Strand 5
A
172 175anti-parallel
Strand 6
A
129 135anti-parallel
Strand 7
A
167 168anti-parallel
Strand 8
A
143 146anti-parallel
Strand 9
A
155 158anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
48 53parallel
Strand 3
A
2 6parallel
Strand 4
A
102 106parallel
Strand 5
A
172 175anti-parallel
Strand 6
A
129 135anti-parallel
Strand 7
A
209 213parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 112first strand
Strand 2
A
219 222anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
48 53parallel
Strand 3
B
2 6parallel
Strand 4
B
102 106parallel
Strand 5
B
172 175anti-parallel
Strand 6
B
129 135anti-parallel
Strand 7
B
167 168anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
48 53parallel
Strand 3
B
2 6parallel
Strand 4
B
102 106parallel
Strand 5
B
172 175anti-parallel
Strand 6
B
129 135anti-parallel
Strand 7
B
209 213parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 112first strand
Strand 2
B
219 222anti-parallel
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