Analysis of interatomic Contacts of Structural Units in PDB entry:
6B66


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B66 entry

There are 2 chains in PDB entry 6B66 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 252
B
 MET 1LYS 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6B66. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 23Right-handed alpha
Helix 2
AA2
A
25 30Right-handed alpha
Helix 3
AA3
A
44 58Right-handed alpha
Helix 4
AA4
A
86 93Right-handed alpha
Helix 5
AA5
A
108 110Right-handed 310
Helix 6
AA6
A
171 181Right-handed alpha
Helix 7
AA7
A
197 211Right-handed alpha
Helix 8
AA8
A
242 251Right-handed alpha
Helix 9
AA9
B
2 23Right-handed alpha
Helix 10
AB1
B
25 30Right-handed alpha
Helix 11
AB2
B
44 58Right-handed alpha
Helix 12
AB3
B
86 93Right-handed alpha
Helix 13
AB4
B
108 110Right-handed 310
Helix 14
AB5
B
171 181Right-handed alpha
Helix 15
AB6
B
197 211Right-handed alpha
Helix 16
AB7
B
242 251Right-handed alpha
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There are 6 sheets in PDB entry 6B66. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 35first strand
Strand 2
A
41 43anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
62 66anti-parallel
Strand 3
A
77 85parallel
Strand 4
A
98 104anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
125 129anti-parallel
Strand 7
A
132 135anti-parallel
Strand 8
A
138 139anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
151 155parallel
Strand 3
A
186 189parallel
Strand 4
A
236 239anti-parallel
Strand 5
A
214 216anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
41 43anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
62 66anti-parallel
Strand 3
B
77 85parallel
Strand 4
B
98 104anti-parallel
Strand 5
B
112 119anti-parallel
Strand 6
B
125 129anti-parallel
Strand 7
B
132 135anti-parallel
Strand 8
B
138 139anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 167first strand
Strand 2
B
151 155parallel
Strand 3
B
186 189parallel
Strand 4
B
236 239anti-parallel
Strand 5
B
214 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il