Analysis of interatomic Contacts of Structural Units in PDB entry:
6B7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B7L entry

There is 1 chain in PDB entry 6B7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 6B7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 10Right-handed alpha
Helix 2
AA2
A
139 142Right-handed 310
Helix 3
AA3
A
229 233Right-handed 310
Helix 4
AA4
A
242 254Right-handed alpha
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There are 2 sheets in PDB entry 6B7L. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 111first strand
Strand 2
A
91 100anti-parallel
Strand 3
A
69 80anti-parallel
Strand 4
A
55 66anti-parallel
Strand 5
A
37 48anti-parallel
Strand 6
A
117 124parallel
Strand 7
A
130 137anti-parallel
Strand 8
A
158 163anti-parallel
Strand 9
A
20 28anti-parallel
Strand 10
A
37 48anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
189 195anti-parallel
Strand 3
A
198 205anti-parallel
Strand 4
A
210 217anti-parallel
Strand 5
A
223 228anti-parallel
Strand 6
A
259 267anti-parallel
Strand 7
A
273 278anti-parallel
Strand 8
A
286 291anti-parallel
Strand 9
A
172 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il