Analysis of interatomic Contacts of Structural Units in PDB entry:
6B7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B7O entry

There are 3 chains in PDB entry 6B7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LYS 312
B
 MET 1GLY 76
C
 MET 1GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6B7O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 20Right-handed alpha
Helix 2
AA2
A
29 33Right-handed 310
Helix 3
AA3
A
65 67Right-handed 310
Helix 4
AA4
A
68 89Right-handed alpha
Helix 5
AA5
A
100 104Right-handed 310
Helix 6
AA6
A
105 118Right-handed alpha
Helix 7
AA7
A
129 152Right-handed alpha
Helix 8
AA8
A
157 170Right-handed alpha
Helix 9
AA9
A
179 193Right-handed alpha
Helix 10
AB1
A
194 196Right-handed 310
Helix 11
AB2
A
198 204Right-handed alpha
Helix 12
AB3
A
212 240Right-handed alpha
Helix 13
AB4
A
250 255Right-handed 310
Helix 14
AB5
A
258 270Right-handed alpha
Helix 15
AB6
A
280 290Right-handed alpha
Helix 16
AB7
A
290 299Right-handed alpha
Helix 17
AB8
B
22 35Right-handed alpha
Helix 18
AB9
B
37 41Right-handed 310
Helix 19
AC1
B
56 60Right-handed 310
Helix 20
AC2
C
22 35Right-handed alpha
Helix 21
AC3
C
37 39Right-handed 310
Helix 22
AC4
C
56 60Right-handed 310
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There are 4 sheets in PDB entry 6B7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 57first strand
Strand 2
A
60 63anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 248first strand
Strand 2
A
273 274anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 70parallel
Strand 4
B
42 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 71parallel
Strand 4
C
41 45anti-parallel
Strand 5
C
48 49anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il