Analysis of interatomic Contacts of Structural Units in PDB entry:
6B7Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B7Y entry

There are 2 chains in PDB entry 6B7Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 46	HIS 1011
B	ALA 46	HIS 1011

There are 81 helices in PDB entry 6B7Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	105	114	Right-handed alpha
Helix 2	AA2	A	125	134	Right-handed alpha
Helix 3	AA3	A	159	171	Right-handed alpha
Helix 4	AA4	A	175	193	Right-handed alpha
Helix 5	AA5	A	196	208	Right-handed alpha
Helix 6	AA6	A	213	217	Right-handed 310
Helix 7	AA7	A	222	233	Right-handed alpha
Helix 8	AA8	A	236	248	Right-handed alpha
Helix 9	AA9	A	264	275	Right-handed alpha
Helix 10	AB1	A	323	328	Right-handed 310
Helix 11	AB2	A	329	339	Right-handed alpha
Helix 12	AB3	A	345	354	Right-handed alpha
Helix 13	AB4	A	380	385	Right-handed alpha
Helix 14	AB5	A	386	405	Right-handed alpha
Helix 15	AB6	A	407	424	Right-handed alpha
Helix 16	AB7	A	429	441	Right-handed alpha
Helix 17	AB8	A	442	444	Right-handed 310
Helix 18	AB9	A	460	471	Right-handed alpha
Helix 19	AC1	A	472	476	Right-handed 310
Helix 20	AC2	A	484	486	Right-handed 310
Helix 21	AC3	A	506	516	Right-handed alpha
Helix 22	AC4	A	586	604	Right-handed alpha
Helix 23	AC5	A	604	614	Right-handed alpha
Helix 24	AC6	A	637	651	Right-handed alpha
Helix 25	AC7	A	655	671	Right-handed alpha
Helix 26	AC8	A	672	676	Right-handed 310
Helix 27	AC9	A	677	690	Right-handed alpha
Helix 28	AD1	A	696	703	Right-handed alpha
Helix 29	AD2	A	704	706	Right-handed 310
Helix 30	AD3	A	708	720	Right-handed alpha
Helix 31	AD4	A	734	754	Right-handed alpha
Helix 32	AD5	A	801	815	Right-handed alpha
Helix 33	AD6	A	816	823	Right-handed alpha
Helix 34	AD7	A	855	876	Right-handed alpha
Helix 35	AD8	A	878	894	Right-handed alpha
Helix 36	AD9	A	899	913	Right-handed alpha
Helix 37	AE1	A	919	929	Right-handed alpha
Helix 38	AE2	A	932	944	Right-handed alpha
Helix 39	AE3	A	994	1001	Right-handed alpha
Helix 40	AE4	B	95	99	Right-handed 310
Helix 41	AE5	B	105	114	Right-handed alpha
Helix 42	AE6	B	125	134	Right-handed alpha
Helix 43	AE7	B	157	164	Right-handed alpha
Helix 44	AE8	B	166	171	Right-handed alpha
Helix 45	AE9	B	175	194	Right-handed alpha
Helix 46	AF1	B	196	208	Right-handed alpha
Helix 47	AF2	B	213	217	Right-handed 310
Helix 48	AF3	B	222	228	Right-handed alpha
Helix 49	AF4	B	228	233	Right-handed alpha
Helix 50	AF5	B	236	247	Right-handed alpha
Helix 51	AF6	B	265	275	Right-handed alpha
Helix 52	AF7	B	276	278	Right-handed 310
Helix 53	AF8	B	329	339	Right-handed alpha
Helix 54	AF9	B	345	354	Right-handed alpha
Helix 55	AG1	B	380	386	Right-handed alpha
Helix 56	AG2	B	386	405	Right-handed alpha
Helix 57	AG3	B	407	424	Right-handed alpha
Helix 58	AG4	B	429	444	Right-handed alpha
Helix 59	AG5	B	460	471	Right-handed alpha
Helix 60	AG6	B	472	476	Right-handed 310
Helix 61	AG7	B	483	486	Right-handed 310
Helix 62	AG8	B	506	516	Right-handed alpha
Helix 63	AG9	B	581	585	Right-handed 310
Helix 64	AH1	B	586	615	Right-handed alpha
Helix 65	AH2	B	637	651	Right-handed alpha
Helix 66	AH3	B	655	673	Right-handed alpha
Helix 67	AH4	B	677	690	Right-handed alpha
Helix 68	AH5	B	696	703	Right-handed alpha
Helix 69	AH6	B	704	707	Right-handed 310
Helix 70	AH7	B	708	720	Right-handed alpha
Helix 71	AH8	B	734	754	Right-handed alpha
Helix 72	AH9	B	759	763	Right-handed 310
Helix 73	AI1	B	801	815	Right-handed alpha
Helix 74	AI2	B	815	822	Right-handed alpha
Helix 75	AI3	B	822	828	Right-handed alpha
Helix 76	AI4	B	855	876	Right-handed alpha
Helix 77	AI5	B	878	894	Right-handed alpha
Helix 78	AI6	B	899	912	Right-handed alpha
Helix 79	AI7	B	919	929	Right-handed alpha
Helix 80	AI8	B	932	944	Right-handed alpha
Helix 81	AI9	B	994	1001	Right-handed alpha

There are 14 sheets in PDB entry 6B7Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	69	first strand
Strand 2	A	73	79	anti-parallel
Strand 3	A	254	260	parallel
Strand 4	A	86	92	anti-parallel
Strand 5	A	147	153	anti-parallel
Strand 6	A	139	142	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	304	first strand
Strand 2	A	477	482	parallel
Strand 3	A	311	316	anti-parallel
Strand 4	A	370	378	anti-parallel
Strand 5	A	319	320	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	304	first strand
Strand 2	A	477	482	parallel
Strand 3	A	311	316	anti-parallel
Strand 4	A	370	378	anti-parallel
Strand 5	A	359	364	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	491	492	first strand
Strand 2	A	499	500	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	549	553	first strand
Strand 2	A	557	563	anti-parallel
Strand 3	A	724	731	parallel
Strand 4	A	571	579	anti-parallel
Strand 5	A	627	634	anti-parallel
Strand 6	A	616	622	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	777	first strand
Strand 2	A	953	959	parallel
Strand 3	A	780	782	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	776	777	first strand
Strand 2	A	953	959	parallel
Strand 3	A	789	795	anti-parallel
Strand 4	A	850	852	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	836	837	first strand
Strand 2	A	846	847	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	69	first strand
Strand 2	B	73	79	anti-parallel
Strand 3	B	254	260	parallel
Strand 4	B	87	92	anti-parallel
Strand 5	B	147	152	anti-parallel
Strand 6	B	139	140	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	304	first strand
Strand 2	B	477	481	parallel
Strand 3	B	312	320	anti-parallel
Strand 4	B	370	378	anti-parallel
Strand 5	B	359	364	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	491	492	first strand
Strand 2	B	499	500	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	549	553	first strand
Strand 2	B	558	562	anti-parallel
Strand 3	B	726	731	parallel
Strand 4	B	571	579	anti-parallel
Strand 5	B	626	634	anti-parallel
Strand 6	B	617	622	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	777	first strand
Strand 2	B	953	958	parallel
Strand 3	B	780	781	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	776	777	first strand
Strand 2	B	953	958	parallel
Strand 3	B	790	795	anti-parallel
Strand 4	B	846	851	anti-parallel
Strand 5	B	832	837	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B7Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B7Y