Analysis of interatomic Contacts of Structural Units in PDB entry:
6B82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B82 entry

There are 2 chains in PDB entry 6B82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 39ARG 507
B
 ARG 39ALA 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6B82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
61 69Right-handed alpha
Helix 2
AA2
A
69 74Right-handed alpha
Helix 3
AA3
A
91 100Right-handed alpha
Helix 4
AA4
A
112 119Right-handed alpha
Helix 5
AA5
A
131 147Right-handed alpha
Helix 6
AA6
A
154 171Right-handed alpha
Helix 7
AA7
A
181 198Right-handed alpha
Helix 8
AA8
A
205 220Right-handed alpha
Helix 9
AA9
A
231 237Right-handed 310
Helix 10
AB1
A
239 267Right-handed alpha
Helix 11
AB2
A
274 288Right-handed alpha
Helix 12
AB3
A
299 332Right-handed alpha
Helix 13
AB4
A
332 347Right-handed alpha
Helix 14
AB5
A
354 358Right-handed 310
Helix 15
AB6
A
361 375Right-handed alpha
Helix 16
AB7
A
406 413Right-handed alpha
Helix 17
AB8
A
424 428Right-handed 310
Helix 18
AB9
A
455 473Right-handed alpha
Helix 19
AC1
B
52 56Right-handed 310
Helix 20
AC2
B
61 69Right-handed alpha
Helix 21
AC3
B
69 74Right-handed alpha
Helix 22
AC4
B
91 100Right-handed alpha
Helix 23
AC5
B
112 119Right-handed alpha
Helix 24
AC6
B
131 148Right-handed alpha
Helix 25
AC7
B
154 172Right-handed alpha
Helix 26
AC8
B
181 198Right-handed alpha
Helix 27
AC9
B
205 222Right-handed alpha
Helix 28
AD1
B
226 231Right-handed alpha
Helix 29
AD2
B
232 237Right-handed 310
Helix 30
AD3
B
239 266Right-handed alpha
Helix 31
AD4
B
274 288Right-handed alpha
Helix 32
AD5
B
299 332Right-handed alpha
Helix 33
AD6
B
332 347Right-handed alpha
Helix 34
AD7
B
354 360Right-handed 310
Helix 35
AD8
B
361 375Right-handed alpha
Helix 36
AD9
B
406 413Right-handed alpha
Helix 37
AE1
B
424 429Right-handed 310
Helix 38
AE2
B
448 452Right-handed 310
Helix 39
AE3
B
455 473Right-handed alpha
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There are 6 sheets in PDB entry 6B82. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 81first strand
Strand 2
A
84 89anti-parallel
Strand 3
A
402 405parallel
Strand 4
A
384 385anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 392first strand
Strand 2
A
395 397anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
474 477first strand
Strand 2
A
503 506anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 81first strand
Strand 2
B
84 89anti-parallel
Strand 3
B
402 405parallel
Strand 4
B
384 385anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
390 392first strand
Strand 2
B
395 397anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
474 477first strand
Strand 2
B
503 506anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il