Analysis of interatomic Contacts of Structural Units in PDB entry:
6B8B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B8B entry

There is 1 chain in PDB entry 6B8B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2TYR 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6B8B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
41 51Right-handed alpha
Helix 2
AA2
A
71 78Right-handed alpha
Helix 3
AA3
A
94 104Right-handed alpha
Helix 4
AA4
A
110 125Right-handed alpha
Helix 5
AA5
A
127 131Right-handed 310
Helix 6
AA6
A
134 138Right-handed 310
Helix 7
AA7
A
139 153Right-handed alpha
Helix 8
AA8
A
169 186Right-handed alpha
Helix 9
AA9
A
196 202Right-handed alpha
Helix 10
AB1
A
220 225Right-handed alpha
Helix 11
AB2
A
227 234Right-handed alpha
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There are 2 sheets in PDB entry 6B8B. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 27first strand
Strand 2
A
3 13anti-parallel
Strand 3
A
57 62anti-parallel
Strand 4
A
65 66anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
158 161parallel
Strand 3
A
189 194parallel
Strand 4
A
31 35parallel
Strand 5
A
206 211parallel
Strand 6
A
214 219anti-parallel
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