Analysis of interatomic Contacts of Structural Units in PDB entry:
6B9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B9I entry

There are 2 chains in PDB entry 6B9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 288
B
 MET 1THR 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6B9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 12Right-handed 310
Helix 2
AA2
A
14 22Right-handed alpha
Helix 3
AA3
A
45 55Right-handed alpha
Helix 4
AA4
A
66 80Right-handed alpha
Helix 5
AA5
A
96 108Right-handed alpha
Helix 6
AA6
A
121 138Right-handed alpha
Helix 7
AA7
A
141 154Right-handed alpha
Helix 8
AA8
A
165 172Right-handed alpha
Helix 9
AA9
A
177 181Right-handed 310
Helix 10
AB1
A
206 223Right-handed alpha
Helix 11
AB2
A
237 252Right-handed alpha
Helix 12
AB3
A
264 272Right-handed alpha
Helix 13
AB4
B
10 12Right-handed 310
Helix 14
AB5
B
14 22Right-handed alpha
Helix 15
AB6
B
45 56Right-handed alpha
Helix 16
AB7
B
66 80Right-handed alpha
Helix 17
AB8
B
96 108Right-handed alpha
Helix 18
AB9
B
121 138Right-handed alpha
Helix 19
AC1
B
141 155Right-handed alpha
Helix 20
AC2
B
165 172Right-handed alpha
Helix 21
AC3
B
206 223Right-handed alpha
Helix 22
AC4
B
237 252Right-handed alpha
Helix 23
AC5
B
264 272Right-handed alpha
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There are 6 sheets in PDB entry 6B9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 26first strand
Strand 2
A
3 8parallel
Strand 3
A
84 89parallel
Strand 4
A
112 117parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 39first strand
Strand 2
A
29 31anti-parallel
Strand 3
A
61 63anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
197 204first strand
Strand 2
A
188 194anti-parallel
Strand 3
A
156 161anti-parallel
Strand 4
A
276 281anti-parallel
Strand 5
A
229 234anti-parallel
Strand 6
A
257 262parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 26first strand
Strand 2
B
3 8parallel
Strand 3
B
84 89parallel
Strand 4
B
112 117parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 39first strand
Strand 2
B
29 31anti-parallel
Strand 3
B
61 63anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
197 204first strand
Strand 2
B
188 194anti-parallel
Strand 3
B
156 161anti-parallel
Strand 4
B
276 281anti-parallel
Strand 5
B
229 234anti-parallel
Strand 6
B
257 262parallel
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