Analysis of interatomic Contacts of Structural Units in PDB entry:
6B9T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B9T entry

There are 8 chains in PDB entry 6B9T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 10	ASN 456
B	ASP 10	SER 455
C	ASP 10	ASN 456
D	LYS 4	ASN 456
E	ASP 10	LYS 453
F	ASP 10	ASN 456
G	ASP 10	SER 455
H	ASP 10	ASP 451

There are129 helices in PDB entry 6B9T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	27	Right-handed alpha
Helix 2	AA2	A	30	39	Right-handed alpha
Helix 3	AA3	A	41	50	Right-handed alpha
Helix 4	AA4	A	56	67	Right-handed alpha
Helix 5	AA5	A	70	75	Right-handed 310
Helix 6	AA6	A	89	96	Right-handed alpha
Helix 7	AA7	A	215	223	Right-handed alpha
Helix 8	AA8	A	225	231	Right-handed alpha
Helix 9	AA9	A	238	255	Right-handed alpha
Helix 10	AB1	A	257	266	Right-handed alpha
Helix 11	AB2	A	268	277	Right-handed alpha
Helix 12	AB3	A	283	294	Right-handed alpha
Helix 13	AB4	A	297	302	Right-handed alpha
Helix 14	AB5	A	315	319	Right-handed 310
Helix 15	AB6	A	425	435	Right-handed alpha
Helix 16	AB7	A	438	444	Right-handed alpha
Helix 17	AB8	B	11	27	Right-handed alpha
Helix 18	AB9	B	30	39	Right-handed alpha
Helix 19	AC1	B	41	50	Right-handed alpha
Helix 20	AC2	B	56	67	Right-handed alpha
Helix 21	AC3	B	70	75	Right-handed 310
Helix 22	AC4	B	89	96	Right-handed alpha
Helix 23	AC5	B	215	223	Right-handed alpha
Helix 24	AC6	B	225	231	Right-handed alpha
Helix 25	AC7	B	238	255	Right-handed alpha
Helix 26	AC8	B	257	266	Right-handed alpha
Helix 27	AC9	B	268	277	Right-handed alpha
Helix 28	AD1	B	283	295	Right-handed alpha
Helix 29	AD2	B	297	302	Right-handed alpha
Helix 30	AD3	B	315	319	Right-handed 310
Helix 31	AD4	B	425	435	Right-handed alpha
Helix 32	AD5	B	438	444	Right-handed alpha
Helix 33	AD6	C	11	27	Right-handed alpha
Helix 34	AD7	C	30	39	Right-handed alpha
Helix 35	AD8	C	41	50	Right-handed alpha
Helix 36	AD9	C	56	67	Right-handed alpha
Helix 37	AE1	C	70	74	Right-handed 310
Helix 38	AE2	C	89	96	Right-handed alpha
Helix 39	AE3	C	215	223	Right-handed alpha
Helix 40	AE4	C	225	231	Right-handed alpha
Helix 41	AE5	C	238	255	Right-handed alpha
Helix 42	AE6	C	257	266	Right-handed alpha
Helix 43	AE7	C	268	277	Right-handed alpha
Helix 44	AE8	C	283	294	Right-handed alpha
Helix 45	AE9	C	297	302	Right-handed alpha
Helix 46	AF1	C	315	319	Right-handed 310
Helix 47	AF2	C	425	435	Right-handed alpha
Helix 48	AF3	C	438	444	Right-handed alpha
Helix 49	AF4	D	10	27	Right-handed alpha
Helix 50	AF5	D	30	39	Right-handed alpha
Helix 51	AF6	D	41	50	Right-handed alpha
Helix 52	AF7	D	56	67	Right-handed alpha
Helix 53	AF8	D	70	75	Right-handed 310
Helix 54	AF9	D	89	96	Right-handed alpha
Helix 55	AG1	D	215	223	Right-handed alpha
Helix 56	AG2	D	225	230	Right-handed alpha
Helix 57	AG3	D	231	233	Right-handed 310
Helix 58	AG4	D	238	255	Right-handed alpha
Helix 59	AG5	D	257	266	Right-handed alpha
Helix 60	AG6	D	268	277	Right-handed alpha
Helix 61	AG7	D	283	294	Right-handed alpha
Helix 62	AG8	D	297	302	Right-handed alpha
Helix 63	AG9	D	315	319	Right-handed 310
Helix 64	AH1	D	425	435	Right-handed alpha
Helix 65	AH2	D	438	444	Right-handed alpha
Helix 66	AH3	E	11	27	Right-handed alpha
Helix 67	AH4	E	30	39	Right-handed alpha
Helix 68	AH5	E	41	50	Right-handed alpha
Helix 69	AH6	E	56	67	Right-handed alpha
Helix 70	AH7	E	70	75	Right-handed 310
Helix 71	AH8	E	89	96	Right-handed alpha
Helix 72	AH9	E	215	223	Right-handed alpha
Helix 73	AI1	E	225	231	Right-handed alpha
Helix 74	AI2	E	238	255	Right-handed alpha
Helix 75	AI3	E	257	266	Right-handed alpha
Helix 76	AI4	E	268	277	Right-handed alpha
Helix 77	AI5	E	283	294	Right-handed alpha
Helix 78	AI6	E	297	302	Right-handed alpha
Helix 79	AI7	E	315	319	Right-handed 310
Helix 80	AI8	E	425	435	Right-handed alpha
Helix 81	AI9	E	438	444	Right-handed alpha
Helix 82	AJ1	F	11	27	Right-handed alpha
Helix 83	AJ2	F	30	39	Right-handed alpha
Helix 84	AJ3	F	41	50	Right-handed alpha
Helix 85	AJ4	F	56	67	Right-handed alpha
Helix 86	AJ5	F	70	74	Right-handed 310
Helix 87	AJ6	F	89	96	Right-handed alpha
Helix 88	AJ7	F	215	223	Right-handed alpha
Helix 89	AJ8	F	225	231	Right-handed alpha
Helix 90	AJ9	F	238	255	Right-handed alpha
Helix 91	AK1	F	257	266	Right-handed alpha
Helix 92	AK2	F	268	277	Right-handed alpha
Helix 93	AK3	F	283	294	Right-handed alpha
Helix 94	AK4	F	297	302	Right-handed alpha
Helix 95	AK5	F	315	319	Right-handed 310
Helix 96	AK6	F	425	435	Right-handed alpha
Helix 97	AK7	F	438	444	Right-handed alpha
Helix 98	AK8	G	11	27	Right-handed alpha
Helix 99	AK9	G	30	39	Right-handed alpha
Helix 100	AL1	G	41	50	Right-handed alpha
Helix 101	AL2	G	56	67	Right-handed alpha
Helix 102	AL3	G	70	75	Right-handed 310
Helix 103	AL4	G	89	96	Right-handed alpha
Helix 104	AL5	G	215	223	Right-handed alpha
Helix 105	AL6	G	225	231	Right-handed alpha
Helix 106	AL7	G	238	255	Right-handed alpha
Helix 107	AL8	G	257	266	Right-handed alpha
Helix 108	AL9	G	268	277	Right-handed alpha
Helix 109	AM1	G	283	294	Right-handed alpha
Helix 110	AM2	G	297	302	Right-handed alpha
Helix 111	AM3	G	315	319	Right-handed 310
Helix 112	AM4	G	425	435	Right-handed alpha
Helix 113	AM5	G	438	444	Right-handed alpha
Helix 114	AM6	H	11	27	Right-handed alpha
Helix 115	AM7	H	30	39	Right-handed alpha
Helix 116	AM8	H	41	50	Right-handed alpha
Helix 117	AM9	H	56	67	Right-handed alpha
Helix 118	AN1	H	70	75	Right-handed 310
Helix 119	AN2	H	89	96	Right-handed alpha
Helix 120	AN3	H	215	223	Right-handed alpha
Helix 121	AN4	H	225	231	Right-handed alpha
Helix 122	AN5	H	238	255	Right-handed alpha
Helix 123	AN6	H	257	266	Right-handed alpha
Helix 124	AN7	H	268	277	Right-handed alpha
Helix 125	AN8	H	283	294	Right-handed alpha
Helix 126	AN9	H	297	302	Right-handed alpha
Helix 127	AO1	H	315	319	Right-handed 310
Helix 128	AO2	H	425	435	Right-handed alpha
Helix 129	AO3	H	438	444	Right-handed alpha

There are 32 sheets in PDB entry 6B9T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	88	first strand
Strand 2	A	397	400	anti-parallel
Strand 3	A	366	371	anti-parallel
Strand 4	A	406	419	anti-parallel
Strand 5	A	345	353	anti-parallel
Strand 6	A	330	334	anti-parallel
Strand 7	A	321	324	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	88	first strand
Strand 2	A	397	400	anti-parallel
Strand 3	A	366	371	anti-parallel
Strand 4	A	406	419	anti-parallel
Strand 5	A	377	382	anti-parallel
Strand 6	A	387	392	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	102	first strand
Strand 2	A	105	112	anti-parallel
Strand 3	A	121	128	anti-parallel
Strand 4	A	203	209	anti-parallel
Strand 5	A	151	157	anti-parallel
Strand 6	A	181	184	anti-parallel
Strand 7	A	311	314	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	132	first strand
Strand 2	A	190	195	parallel
Strand 3	A	160	165	anti-parallel
Strand 4	A	171	176	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	397	400	anti-parallel
Strand 3	B	366	371	anti-parallel
Strand 4	B	406	419	anti-parallel
Strand 5	B	345	353	anti-parallel
Strand 6	B	330	334	anti-parallel
Strand 7	B	321	324	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	397	400	anti-parallel
Strand 3	B	366	371	anti-parallel
Strand 4	B	406	419	anti-parallel
Strand 5	B	377	382	anti-parallel
Strand 6	B	387	392	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	102	first strand
Strand 2	B	105	112	anti-parallel
Strand 3	B	121	128	anti-parallel
Strand 4	B	203	209	anti-parallel
Strand 5	B	151	157	anti-parallel
Strand 6	B	181	184	anti-parallel
Strand 7	B	311	314	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	132	first strand
Strand 2	B	190	195	parallel
Strand 3	B	160	165	anti-parallel
Strand 4	B	171	175	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	397	400	anti-parallel
Strand 3	C	366	371	anti-parallel
Strand 4	C	406	419	anti-parallel
Strand 5	C	345	352	anti-parallel
Strand 6	C	330	334	anti-parallel
Strand 7	C	321	324	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	397	400	anti-parallel
Strand 3	C	366	371	anti-parallel
Strand 4	C	406	419	anti-parallel
Strand 5	C	377	383	anti-parallel
Strand 6	C	386	392	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	102	first strand
Strand 2	C	105	112	anti-parallel
Strand 3	C	121	128	anti-parallel
Strand 4	C	203	209	anti-parallel
Strand 5	C	151	157	anti-parallel
Strand 6	C	181	184	anti-parallel
Strand 7	C	311	314	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	132	first strand
Strand 2	C	190	195	parallel
Strand 3	C	160	165	anti-parallel
Strand 4	C	171	176	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	397	400	anti-parallel
Strand 3	D	366	371	anti-parallel
Strand 4	D	406	419	anti-parallel
Strand 5	D	345	353	anti-parallel
Strand 6	D	330	334	anti-parallel
Strand 7	D	321	324	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	397	400	anti-parallel
Strand 3	D	366	371	anti-parallel
Strand 4	D	406	419	anti-parallel
Strand 5	D	377	383	anti-parallel
Strand 6	D	386	392	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	98	102	first strand
Strand 2	D	105	112	anti-parallel
Strand 3	D	121	128	anti-parallel
Strand 4	D	203	209	anti-parallel
Strand 5	D	151	157	anti-parallel
Strand 6	D	181	184	anti-parallel
Strand 7	D	311	314	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	132	first strand
Strand 2	D	190	195	parallel
Strand 3	D	160	165	anti-parallel
Strand 4	D	171	175	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	88	first strand
Strand 2	E	397	400	anti-parallel
Strand 3	E	366	371	anti-parallel
Strand 4	E	406	419	anti-parallel
Strand 5	E	345	353	anti-parallel
Strand 6	E	330	334	anti-parallel
Strand 7	E	321	324	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	88	first strand
Strand 2	E	397	400	anti-parallel
Strand 3	E	366	371	anti-parallel
Strand 4	E	406	419	anti-parallel
Strand 5	E	377	383	anti-parallel
Strand 6	E	386	392	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	98	102	first strand
Strand 2	E	105	112	anti-parallel
Strand 3	E	121	128	anti-parallel
Strand 4	E	203	209	anti-parallel
Strand 5	E	151	157	anti-parallel
Strand 6	E	181	184	anti-parallel
Strand 7	E	311	314	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	132	first strand
Strand 2	E	190	195	parallel
Strand 3	E	160	165	anti-parallel
Strand 4	E	171	176	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	88	first strand
Strand 2	F	397	400	anti-parallel
Strand 3	F	366	371	anti-parallel
Strand 4	F	406	419	anti-parallel
Strand 5	F	345	352	anti-parallel
Strand 6	F	330	334	anti-parallel
Strand 7	F	321	324	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	88	first strand
Strand 2	F	397	400	anti-parallel
Strand 3	F	366	371	anti-parallel
Strand 4	F	406	419	anti-parallel
Strand 5	F	377	383	anti-parallel
Strand 6	F	386	392	anti-parallel

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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	98	102	first strand
Strand 2	F	105	112	anti-parallel
Strand 3	F	121	128	anti-parallel
Strand 4	F	203	209	anti-parallel
Strand 5	F	151	157	anti-parallel
Strand 6	F	181	184	anti-parallel
Strand 7	F	311	314	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	132	first strand
Strand 2	F	190	195	parallel
Strand 3	F	160	165	anti-parallel
Strand 4	F	171	175	anti-parallel

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There are 7 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	85	88	first strand
Strand 2	G	397	400	anti-parallel
Strand 3	G	366	371	anti-parallel
Strand 4	G	406	419	anti-parallel
Strand 5	G	345	353	anti-parallel
Strand 6	G	330	334	anti-parallel
Strand 7	G	321	324	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	85	88	first strand
Strand 2	G	397	400	anti-parallel
Strand 3	G	366	371	anti-parallel
Strand 4	G	406	419	anti-parallel
Strand 5	G	377	383	anti-parallel
Strand 6	G	386	392	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	98	102	first strand
Strand 2	G	105	112	anti-parallel
Strand 3	G	121	128	anti-parallel
Strand 4	G	203	209	anti-parallel
Strand 5	G	151	157	anti-parallel
Strand 6	G	181	184	anti-parallel
Strand 7	G	311	314	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	132	first strand
Strand 2	G	190	195	parallel
Strand 3	G	160	165	anti-parallel
Strand 4	G	171	176	anti-parallel

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There are 7 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	85	88	first strand
Strand 2	H	397	400	anti-parallel
Strand 3	H	366	371	anti-parallel
Strand 4	H	411	419	anti-parallel
Strand 5	H	345	352	anti-parallel
Strand 6	H	330	334	anti-parallel
Strand 7	H	321	324	anti-parallel

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There are 7 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	102	first strand
Strand 2	H	105	112	anti-parallel
Strand 3	H	121	128	anti-parallel
Strand 4	H	203	209	anti-parallel
Strand 5	H	151	157	anti-parallel
Strand 6	H	181	184	anti-parallel
Strand 7	H	311	314	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	132	first strand
Strand 2	H	190	195	parallel
Strand 3	H	160	165	anti-parallel
Strand 4	H	171	175	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	386	392	first strand
Strand 2	H	377	383	anti-parallel
Strand 3	H	406	409	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B9T

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B9T