Analysis of interatomic Contacts of Structural Units in PDB entry:
6B9U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B9U entry

There are 2 chains in PDB entry 6B9U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ILE 253
B
 SER 3ILE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6B9U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 29Right-handed alpha
Helix 2
AA2
A
39 51Right-handed alpha
Helix 3
AA3
A
63 79Right-handed alpha
Helix 4
AA4
A
96 100Right-handed 310
Helix 5
AA5
A
101 113Right-handed alpha
Helix 6
AA6
A
113 133Right-handed alpha
Helix 7
AA7
A
144 148Right-handed 310
Helix 8
AA8
A
154 176Right-handed alpha
Helix 9
AA9
A
194 199Right-handed alpha
Helix 10
AB1
A
208 213Right-handed alpha
Helix 11
AB2
A
221 233Right-handed alpha
Helix 12
AB3
A
234 238Right-handed 310
Helix 13
AB4
B
16 29Right-handed alpha
Helix 14
AB5
B
39 51Right-handed alpha
Helix 15
AB6
B
63 79Right-handed alpha
Helix 16
AB7
B
96 100Right-handed 310
Helix 17
AB8
B
101 113Right-handed alpha
Helix 18
AB9
B
113 133Right-handed alpha
Helix 19
AC1
B
144 148Right-handed 310
Helix 20
AC2
B
154 176Right-handed alpha
Helix 21
AC3
B
194 199Right-handed alpha
Helix 22
AC4
B
210 214Right-handed 310
Helix 23
AC5
B
221 233Right-handed alpha
Helix 24
AC6
B
234 238Right-handed 310
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There are 2 sheets in PDB entry 6B9U. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
32 37parallel
Strand 3
A
8 12parallel
Strand 4
A
83 86parallel
Strand 5
A
137 142parallel
Strand 6
A
180 187parallel
Strand 7
A
244 247parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
32 37parallel
Strand 3
B
8 12parallel
Strand 4
B
83 86parallel
Strand 5
B
137 142parallel
Strand 6
B
180 187parallel
Strand 7
B
244 247parallel
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