Analysis of interatomic Contacts of Structural Units in PDB entry:
6BA0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BA0 entry

There are 4 chains in PDB entry 6BA0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 312
B	MET 1	LYS 312
C	MET 1	LYS 312
D	MET 1	LYS 312

There are 48 helices in PDB entry 6BA0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	11	24	Right-handed alpha
Helix 2	AA2	A	40	55	Right-handed alpha
Helix 3	AA3	A	102	114	Right-handed alpha
Helix 4	AA4	A	127	137	Right-handed alpha
Helix 5	AA5	A	139	144	Right-handed alpha
Helix 6	AA6	A	164	170	Right-handed alpha
Helix 7	AA7	A	170	179	Right-handed alpha
Helix 8	AA8	A	188	193	Right-handed alpha
Helix 9	AA9	A	198	208	Right-handed alpha
Helix 10	AB1	A	210	227	Right-handed alpha
Helix 11	AB2	A	240	249	Right-handed alpha
Helix 12	AB3	A	296	312	Right-handed alpha
Helix 13	AB4	B	11	24	Right-handed alpha
Helix 14	AB5	B	40	55	Right-handed alpha
Helix 15	AB6	B	102	114	Right-handed alpha
Helix 16	AB7	B	127	137	Right-handed alpha
Helix 17	AB8	B	139	144	Right-handed alpha
Helix 18	AB9	B	164	170	Right-handed alpha
Helix 19	AC1	B	170	179	Right-handed alpha
Helix 20	AC2	B	188	193	Right-handed alpha
Helix 21	AC3	B	198	208	Right-handed alpha
Helix 22	AC4	B	210	227	Right-handed alpha
Helix 23	AC5	B	240	249	Right-handed alpha
Helix 24	AC6	B	296	312	Right-handed alpha
Helix 25	AC7	C	11	24	Right-handed alpha
Helix 26	AC8	C	40	55	Right-handed alpha
Helix 27	AC9	C	102	114	Right-handed alpha
Helix 28	AD1	C	127	137	Right-handed alpha
Helix 29	AD2	C	139	144	Right-handed alpha
Helix 30	AD3	C	164	170	Right-handed alpha
Helix 31	AD4	C	170	179	Right-handed alpha
Helix 32	AD5	C	188	193	Right-handed alpha
Helix 33	AD6	C	198	209	Right-handed alpha
Helix 34	AD7	C	210	227	Right-handed alpha
Helix 35	AD8	C	240	249	Right-handed alpha
Helix 36	AD9	C	296	312	Right-handed alpha
Helix 37	AE1	D	11	24	Right-handed alpha
Helix 38	AE2	D	40	55	Right-handed alpha
Helix 39	AE3	D	102	114	Right-handed alpha
Helix 40	AE4	D	127	137	Right-handed alpha
Helix 41	AE5	D	139	144	Right-handed alpha
Helix 42	AE6	D	164	170	Right-handed alpha
Helix 43	AE7	D	170	179	Right-handed alpha
Helix 44	AE8	D	188	193	Right-handed alpha
Helix 45	AE9	D	198	208	Right-handed alpha
Helix 46	AF1	D	210	227	Right-handed alpha
Helix 47	AF2	D	240	249	Right-handed alpha
Helix 48	AF3	D	296	312	Right-handed alpha

There are 8 sheets in PDB entry 6BA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	64	first strand
Strand 2	A	27	34	parallel
Strand 3	A	2	8	parallel
Strand 4	A	119	123	parallel
Strand 5	A	146	150	parallel
Strand 6	A	184	187	parallel
Strand 7	A	289	295	parallel
Strand 8	A	253	257	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	260	262	first strand
Strand 2	A	273	275	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	27	34	parallel
Strand 3	B	2	8	parallel
Strand 4	B	119	123	parallel
Strand 5	B	146	150	parallel
Strand 6	B	184	187	parallel
Strand 7	B	289	295	parallel
Strand 8	B	253	257	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	260	262	first strand
Strand 2	B	273	275	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	64	first strand
Strand 2	C	27	34	parallel
Strand 3	C	2	8	parallel
Strand 4	C	119	123	parallel
Strand 5	C	146	150	parallel
Strand 6	C	184	187	parallel
Strand 7	C	289	295	parallel
Strand 8	C	253	257	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	260	262	first strand
Strand 2	C	273	275	anti-parallel

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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	64	first strand
Strand 2	D	27	34	parallel
Strand 3	D	2	8	parallel
Strand 4	D	119	123	parallel
Strand 5	D	146	150	parallel
Strand 6	D	184	187	parallel
Strand 7	D	289	295	parallel
Strand 8	D	253	257	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	260	262	first strand
Strand 2	D	273	275	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BA0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BA0