Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BAC entry

There is 1 chain in PDB entry 6BAC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LEU 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6BAC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
24 29Right-handed 310
Helix 3
AA3
A
59 65Right-handed alpha
Helix 4
AA4
A
74 88Right-handed alpha
Helix 5
AA5
A
111 126Right-handed alpha
Helix 6
AA6
A
134 150Right-handed alpha
Helix 7
AA7
A
163 167Right-handed 310
Helix 8
AA8
A
168 186Right-handed alpha
Helix 9
AA9
A
186 192Right-handed alpha
Helix 10
AB1
A
196 209Right-handed alpha
Helix 11
AB2
A
239 254Right-handed alpha
Helix 12
AB3
A
288 298Right-handed alpha
Helix 13
AB4
A
309 317Right-handed alpha
Helix 14
AB5
A
318 323Right-handed alpha
Helix 15
AB6
A
356 370Right-handed alpha
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There are 3 sheets in PDB entry 6BAC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
31 36parallel
Strand 3
A
2 6parallel
Strand 4
A
68 71parallel
Strand 5
A
93 96parallel
Strand 6
A
129 131parallel
Strand 7
A
107 109parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 265first strand
Strand 2
A
153 161parallel
Strand 3
A
274 283anti-parallel
Strand 4
A
339 350anti-parallel
Strand 5
A
328 336anti-parallel
Strand 6
A
303 305parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 227first strand
Strand 2
A
268 269anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il