Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BAF entry

There is 1 chain in PDB entry 6BAF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 16ALA 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6BAF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 21Right-handed 310
Helix 2
AA2
A
51 57Right-handed alpha
Helix 3
AA3
A
59 64Right-handed alpha
Helix 4
AA4
A
67 72Right-handed 310
Helix 5
AA5
A
73 85Right-handed alpha
Helix 6
AA6
A
134 151Right-handed alpha
Helix 7
AA7
A
153 170Right-handed alpha
Helix 8
AA8
A
205 209Right-handed 310
Helix 9
AA9
A
210 218Right-handed alpha
Helix 10
AB1
A
256 267Right-handed alpha
Helix 11
AB2
A
298 316Right-handed alpha
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There are 2 sheets in PDB entry 6BAF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 29first strand
Strand 2
A
233 237anti-parallel
Strand 3
A
45 49anti-parallel
Strand 4
A
34 38anti-parallel
Strand 5
A
118 125anti-parallel
Strand 6
A
105 115anti-parallel
Strand 7
A
95 100anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
185 192anti-parallel
Strand 3
A
173 179anti-parallel
Strand 4
A
281 290anti-parallel
Strand 5
A
270 278anti-parallel
Strand 6
A
222 225anti-parallel
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