Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BAL entry

There are 5 chains in PDB entry 6BAL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 0	GLY 311
B	ASN -1	GLY 311
C	ASN -1	GLY 311
D	ALA 0	GLY 311
E	ALA 0	LEU 101

There are107 helices in PDB entry 6BAL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	24	Right-handed alpha
Helix 2	AA2	A	38	48	Right-handed alpha
Helix 3	AA3	A	63	68	Right-handed alpha
Helix 4	AA4	A	86	89	Right-handed 310
Helix 5	AA5	A	90	109	Right-handed alpha
Helix 6	AA6	A	120	135	Right-handed alpha
Helix 7	AA7	A	139	141	Right-handed 310
Helix 8	AA8	A	147	163	Right-handed alpha
Helix 9	AA9	A	178	180	Right-handed 310
Helix 10	AB1	A	186	189	Right-handed 310
Helix 11	AB2	A	198	208	Right-handed alpha
Helix 12	AB3	A	208	217	Right-handed alpha
Helix 13	AB4	A	224	243	Right-handed alpha
Helix 14	AB5	A	284	310	Right-handed alpha
Helix 15	AB6	B	10	24	Right-handed alpha
Helix 16	AB7	B	38	48	Right-handed alpha
Helix 17	AB8	B	63	68	Right-handed alpha
Helix 18	AB9	B	86	109	Right-handed alpha
Helix 19	AC1	B	120	135	Right-handed alpha
Helix 20	AC2	B	139	141	Right-handed 310
Helix 21	AC3	B	147	163	Right-handed alpha
Helix 22	AC4	B	165	169	Right-handed 310
Helix 23	AC5	B	178	180	Right-handed 310
Helix 24	AC6	B	186	189	Right-handed 310
Helix 25	AC7	B	195	197	Right-handed 310
Helix 26	AC8	B	198	208	Right-handed alpha
Helix 27	AC9	B	208	215	Right-handed alpha
Helix 28	AD1	B	216	220	Right-handed 310
Helix 29	AD2	B	223	244	Right-handed alpha
Helix 30	AD3	B	284	311	Right-handed alpha
Helix 31	AD4	C	10	24	Right-handed alpha
Helix 32	AD5	C	38	48	Right-handed alpha
Helix 33	AD6	C	63	68	Right-handed alpha
Helix 34	AD7	C	87	109	Right-handed alpha
Helix 35	AD8	C	120	135	Right-handed alpha
Helix 36	AD9	C	139	141	Right-handed 310
Helix 37	AE1	C	147	163	Right-handed alpha
Helix 38	AE2	C	178	180	Right-handed 310
Helix 39	AE3	C	186	189	Right-handed 310
Helix 40	AE4	C	198	208	Right-handed alpha
Helix 41	AE5	C	208	217	Right-handed alpha
Helix 42	AE6	C	224	243	Right-handed alpha
Helix 43	AE7	C	284	311	Right-handed alpha
Helix 44	AE8	D	10	24	Right-handed alpha
Helix 45	AE9	D	38	48	Right-handed alpha
Helix 46	AF1	D	63	68	Right-handed alpha
Helix 47	AF2	D	86	89	Right-handed 310
Helix 48	AF3	D	90	109	Right-handed alpha
Helix 49	AF4	D	120	135	Right-handed alpha
Helix 50	AF5	D	139	141	Right-handed 310
Helix 51	AF6	D	147	163	Right-handed alpha
Helix 52	AF7	D	186	189	Right-handed 310
Helix 53	AF8	D	198	217	Right-handed alpha
Helix 54	AF9	D	224	243	Right-handed alpha
Helix 55	AG1	D	284	311	Right-handed alpha
Helix 56	AG2	E	10	24	Right-handed alpha
Helix 57	AG3	E	38	48	Right-handed alpha
Helix 58	AG4	E	63	68	Right-handed alpha
Helix 59	AG5	E	87	109	Right-handed alpha
Helix 60	AG6	E	120	135	Right-handed alpha
Helix 61	AG7	E	147	163	Right-handed alpha
Helix 62	AG8	E	178	180	Right-handed 310
Helix 63	AG9	E	186	189	Right-handed 310
Helix 64	AH1	E	195	208	Right-handed alpha
Helix 65	AH2	E	208	215	Right-handed alpha
Helix 66	AH3	E	216	220	Right-handed 310
Helix 67	AH4	E	223	243	Right-handed alpha
Helix 68	AH5	E	284	311	Right-handed alpha
Helix 69	AH6	F	10	24	Right-handed alpha
Helix 70	AH7	F	38	47	Right-handed alpha
Helix 71	AH8	F	63	68	Right-handed alpha
Helix 72	AH9	F	90	109	Right-handed alpha
Helix 73	AI1	F	120	135	Right-handed alpha
Helix 74	AI2	F	139	141	Right-handed 310
Helix 75	AI3	F	147	163	Right-handed alpha
Helix 76	AI4	F	165	169	Right-handed 310
Helix 77	AI5	F	178	180	Right-handed 310
Helix 78	AI6	F	186	189	Right-handed 310
Helix 79	AI7	F	198	208	Right-handed alpha
Helix 80	AI8	F	208	217	Right-handed alpha
Helix 81	AI9	F	224	244	Right-handed alpha
Helix 82	AJ1	F	284	310	Right-handed alpha
Helix 83	AJ2	G	10	24	Right-handed alpha
Helix 84	AJ3	G	38	48	Right-handed alpha
Helix 85	AJ4	G	63	68	Right-handed alpha
Helix 86	AJ5	G	92	109	Right-handed alpha
Helix 87	AJ6	G	120	135	Right-handed alpha
Helix 88	AJ7	G	139	141	Right-handed 310
Helix 89	AJ8	G	147	163	Right-handed alpha
Helix 90	AJ9	G	178	180	Right-handed 310
Helix 91	AK1	G	186	189	Right-handed 310
Helix 92	AK2	G	195	208	Right-handed alpha
Helix 93	AK3	G	208	217	Right-handed alpha
Helix 94	AK4	G	224	243	Right-handed alpha
Helix 95	AK5	G	284	311	Right-handed alpha
Helix 96	AK6	H	10	24	Right-handed alpha
Helix 97	AK7	H	38	48	Right-handed alpha
Helix 98	AK8	H	63	68	Right-handed alpha
Helix 99	AK9	H	87	109	Right-handed alpha
Helix 100	AL1	H	120	135	Right-handed alpha
Helix 101	AL2	H	147	163	Right-handed alpha
Helix 102	AL3	H	178	180	Right-handed 310
Helix 103	AL4	H	186	189	Right-handed 310
Helix 104	AL5	H	198	208	Right-handed alpha
Helix 105	AL6	H	208	217	Right-handed alpha
Helix 106	AL7	H	224	243	Right-handed alpha
Helix 107	AL8	H	284	311	Right-handed alpha

There are 24 sheets in PDB entry 6BAL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	29	33	parallel
Strand 3	A	2	6	parallel
Strand 4	A	72	75	parallel
Strand 5	A	113	116	parallel
Strand 6	A	143	145	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	175	first strand
Strand 2	A	182	184	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	254	first strand
Strand 2	A	262	270	anti-parallel
Strand 3	A	273	277	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	58	first strand
Strand 2	B	29	33	parallel
Strand 3	B	2	6	parallel
Strand 4	B	72	75	parallel
Strand 5	B	113	116	parallel
Strand 6	B	143	145	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	175	first strand
Strand 2	B	182	184	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	254	first strand
Strand 2	B	262	270	anti-parallel
Strand 3	B	273	277	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	29	33	parallel
Strand 3	C	2	6	parallel
Strand 4	C	72	75	parallel
Strand 5	C	113	116	parallel
Strand 6	C	143	145	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	173	175	first strand
Strand 2	C	182	184	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	247	254	first strand
Strand 2	C	262	270	anti-parallel
Strand 3	C	273	277	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	58	first strand
Strand 2	D	29	33	parallel
Strand 3	D	2	6	parallel
Strand 4	D	72	75	parallel
Strand 5	D	113	116	parallel
Strand 6	D	143	145	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	173	175	first strand
Strand 2	D	182	184	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	254	first strand
Strand 2	D	262	270	anti-parallel
Strand 3	D	273	277	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	54	58	first strand
Strand 2	E	29	33	parallel
Strand 3	E	2	6	parallel
Strand 4	E	72	75	parallel
Strand 5	E	113	116	parallel
Strand 6	E	143	145	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	173	175	first strand
Strand 2	E	182	184	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	247	254	first strand
Strand 2	E	262	270	anti-parallel
Strand 3	E	273	277	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	54	58	first strand
Strand 2	F	29	33	parallel
Strand 3	F	2	6	parallel
Strand 4	F	72	75	parallel
Strand 5	F	113	116	parallel
Strand 6	F	143	145	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	173	175	first strand
Strand 2	F	182	184	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	247	254	first strand
Strand 2	F	262	270	anti-parallel
Strand 3	F	273	277	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	54	58	first strand
Strand 2	G	29	33	parallel
Strand 3	G	2	6	parallel
Strand 4	G	72	75	parallel
Strand 5	G	113	116	parallel
Strand 6	G	143	145	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	173	175	first strand
Strand 2	G	182	184	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	247	254	first strand
Strand 2	G	262	270	anti-parallel
Strand 3	G	273	277	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	54	58	first strand
Strand 2	H	29	33	parallel
Strand 3	H	2	6	parallel
Strand 4	H	72	75	parallel
Strand 5	H	113	116	parallel
Strand 6	H	143	145	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	173	175	first strand
Strand 2	H	182	184	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	247	254	first strand
Strand 2	H	262	270	anti-parallel
Strand 3	H	273	277	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BAL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAL