Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BAO entry

There are 2 chains in PDB entry 6BAO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 11	GLU 513
B	GLN 11	GLU 513

There are 41 helices in PDB entry 6BAO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	16	21	Right-handed 310
Helix 2	AA2	A	51	57	Right-handed alpha
Helix 3	AA3	A	59	64	Right-handed alpha
Helix 4	AA4	A	67	72	Right-handed 310
Helix 5	AA5	A	73	75	Right-handed 310
Helix 6	AA6	A	76	86	Right-handed alpha
Helix 7	AA7	A	88	93	Right-handed alpha
Helix 8	AA8	A	133	150	Right-handed alpha
Helix 9	AA9	A	153	170	Right-handed alpha
Helix 10	AB1	A	205	209	Right-handed 310
Helix 11	AB2	A	210	220	Right-handed alpha
Helix 12	AB3	A	256	267	Right-handed alpha
Helix 13	AB4	A	298	326	Right-handed alpha
Helix 14	AB5	A	328	344	Right-handed alpha
Helix 15	AB6	A	350	355	Right-handed alpha
Helix 16	AB7	A	355	364	Right-handed alpha
Helix 17	AB8	A	384	389	Right-handed 310
Helix 18	AB9	A	455	458	Right-handed 310
Helix 19	AC1	A	491	509	Right-handed alpha
Helix 20	AC2	A	510	513	Right-handed 310
Helix 21	AC3	B	17	21	Right-handed 310
Helix 22	AC4	B	51	56	Right-handed alpha
Helix 23	AC5	B	59	64	Right-handed alpha
Helix 24	AC6	B	67	72	Right-handed 310
Helix 25	AC7	B	76	86	Right-handed alpha
Helix 26	AC8	B	89	93	Right-handed 310
Helix 27	AC9	B	130	150	Right-handed alpha
Helix 28	AD1	B	153	170	Right-handed alpha
Helix 29	AD2	B	205	209	Right-handed 310
Helix 30	AD3	B	210	218	Right-handed alpha
Helix 31	AD4	B	256	267	Right-handed alpha
Helix 32	AD5	B	298	322	Right-handed alpha
Helix 33	AD6	B	324	344	Right-handed alpha
Helix 34	AD7	B	347	354	Right-handed alpha
Helix 35	AD8	B	355	363	Right-handed alpha
Helix 36	AD9	B	385	389	Right-handed 310
Helix 37	AE1	B	390	395	Right-handed alpha
Helix 38	AE2	B	408	412	Right-handed 310
Helix 39	AE3	B	413	419	Right-handed 310
Helix 40	AE4	B	455	459	Right-handed 310
Helix 41	AE5	B	490	510	Right-handed alpha

There are 9 sheets in PDB entry 6BAO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	29	first strand
Strand 2	A	233	237	anti-parallel
Strand 3	A	45	49	anti-parallel
Strand 4	A	34	38	anti-parallel
Strand 5	A	118	125	anti-parallel
Strand 6	A	104	115	anti-parallel
Strand 7	A	95	101	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	204	first strand
Strand 2	A	185	192	anti-parallel
Strand 3	A	173	179	anti-parallel
Strand 4	A	281	290	anti-parallel
Strand 5	A	270	278	anti-parallel
Strand 6	A	222	225	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	369	first strand
Strand 2	A	438	442	anti-parallel
Strand 3	A	426	430	anti-parallel
Strand 4	A	403	405	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	453	first strand
Strand 2	A	477	482	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	460	462	first strand
Strand 2	A	469	471	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	29	first strand
Strand 2	B	233	237	anti-parallel
Strand 3	B	45	49	anti-parallel
Strand 4	B	34	38	anti-parallel
Strand 5	B	118	125	anti-parallel
Strand 6	B	104	115	anti-parallel
Strand 7	B	95	101	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	204	first strand
Strand 2	B	185	192	anti-parallel
Strand 3	B	173	179	anti-parallel
Strand 4	B	281	290	anti-parallel
Strand 5	B	270	278	anti-parallel
Strand 6	B	222	225	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	378	first strand
Strand 2	B	367	371	anti-parallel
Strand 3	B	438	443	anti-parallel
Strand 4	B	424	430	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	453	first strand
Strand 2	B	477	482	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BAO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BAO